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Difference between revisions of "TSS:Mm 99794.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 uc007mar.1:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC0...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AI480719=
 +
|P55=
 
|all_trans=ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 uc007mar.1:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC004694:0 AK017843:0 AK167236:0 AK009969:0 AK008646:0 AK151242:0 AK162779:0 AK007680:11 ENSMUST00000106750.4:33 AK211509:59 AK206379:83
 
|all_trans=ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 uc007mar.1:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC004694:0 AK017843:0 AK167236:0 AK009969:0 AK008646:0 AK151242:0 AK162779:0 AK007680:11 ENSMUST00000106750.4:33 AK211509:59 AK206379:83
 
|chr=chr11
 
|chr=chr11
Line 6: Line 8:
 
|distance_to_tss=-17
 
|distance_to_tss=-17
 
|end=107479544
 
|end=107479544
 +
|end_of_center_position=107479512
 
|entrez_id=66997
 
|entrez_id=66997
 
|gc_percent=0.701493
 
|gc_percent=0.701493
−
|gene_alias=1500002F15Rik|AI480719|P55
+
|gene_alias=1500002F15Rik
 
|gene_description="proteasome (prosome, macropain) 26S subunit, non-ATPase, 12"
 
|gene_description="proteasome (prosome, macropain) 26S subunit, non-ATPase, 12"
 
|gene_id=66997
 
|gene_id=66997
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|species=mouse
 
|species=mouse
 
|start=107479478
 
|start=107479478
 +
|start_of_center_position=107479511
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 uc007mar.1 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779
 
|transcript_name=ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 uc007mar.1 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779

Revision as of 11:14, 12 May 2019

Basic information about the TSS

TSS ID:mm_99794.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:107479478
End:107479544
Strand:+
TSS Score:1
Start of the center position in the TSS region:107479511
End of the center position in the TSS region:107479512



Gene and protein annotation

Transcript_name:ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 uc007mar.1 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779
Distance:0
GeneID:66997
HGNC/MGI_ID:MGI:1914247
UniProt_ID:Q3TRH2 Q3U8F5 Q9CSW4 Q9D8W5
Gene_name:"proteasome (prosome, macropain) 26S subunit, non-ATPase, 12"
Gene_symbol:Psmd12
Gene_synonyms:1500002F15Rik P55
Gene_source:MGI:1914247



Transcript annotation

Transcript_name:ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 uc007mar.1 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779
Distance:0
Num_trans:22
All_trans:ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 uc007mar.1:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC004694:0 AK017843:0 AK167236:0 AK009969:0 AK008646:0 AK151242:0 AK162779:0 AK007680:11 ENSMUST00000106750.4:33 AK211509:59 AK206379:83



TATA-Box annotation

Distance to TSS:-17
Nearest PromoterID:NM_025894
Entrez ID:66997
Nearest Unigene:Mm.491171
Nearest Refseq:NM_025894
Nearest Ensembl:ENSMUSG00000020720
Gene Name:"proteasome (prosome, macropain) 26S subunit, non-ATPase, 12"
Gene Alias:1500002F15Rik
Gene Description:"proteasome (prosome, macropain) 26S subunit, non-ATPase, 12"
Gene Type:protein-coding
CpG%:0.095
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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