Difference between revisions of "TSS:Hg 117818.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=383 | |distance_to_tss=383 | ||
|end=777123 | |end=777123 | ||
| + | |end_of_center_position=777119 | ||
|entrez_id=347862 | |entrez_id=347862 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=777114 | |start=777114 | ||
| + | |start_of_center_position=777118 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000529362.1 uc057xlu.1 | |transcript_name=ENST00000529362.1 uc057xlu.1 | ||
Revision as of 11:14, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 777118 |
|---|---|
| End of the center position in the TSS region: | 777119 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000529362.1 uc057xlu.1 |
|---|---|
| Distance: | -56 |
| Num_trans: | 47 |
| All_trans: | ENST00000529362.1:-56 uc057xlu.1:-56 KJ904221:-341 ENST00000397472.6:-348 uc001lrd.4:-348 BC110868:-348 ENST00000524550.5:-352 uc057xln.1:-352 BC143419:-358 ENST00000534603.5:-360 ENST00000529966.5:-360 uc010qwn.2:-360 uc057xlq.1:-360 BC112145:-360 BC143415:-360 BC143416:-360 BC143418:-360 BC143421:-360 BC143423:-360 BC143420:-360 BC143422:-360 ENST00000319863.12:-361 ENST00000532839.5:-361 ENST00000528602.1:-361 uc001lrc.4:-361 uc057xls.1:-361 uc057xlt.1:-361 AK091602:-361 ENST00000532320.5:-362 uc057xlo.1:-362 AK309153:-362 ENST00000526325.5:-364 uc057xlm.1:-364 AK092816:-364 AK293559:-364 ENST00000354286.8:-365 uc001lrg.2:-365 AK128653:-378 NM_001318818:-379 NM_001318820:-379 NM_001318821:-379 NM_001318822:-379 NM_001318823:-379 NM_001318824:-379 NM_182612:-379 NR_134867:-379 NR_134868:-379 |
TATA-Box annotation
| Distance to TSS: | 383 |
|---|---|
| Nearest PromoterID: | NM_001318821 |
| Entrez ID: | 347862 |
| Nearest Unigene: | Hs.218362 |
| Nearest Refseq: | NM_182612 |
| Nearest Ensembl: | ENSG00000177225 |
| Gene Name: | Parkinson disease 7 domain containing 1 |
| Gene Alias: | - |
| Gene Description: | Parkinson disease 7 domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
