Difference between revisions of "TSS:Mm 99815.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 uc007mbq.1:0 uc007mbr.1:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |1700029K01Rik= | ||
| + | |8430407H02Rik= | ||
| + | |AV043680= | ||
| + | |AV207351= | ||
| + | |Ccdc46= | ||
| + | |Macoco= | ||
|all_trans=ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 uc007mbq.1:0 uc007mbr.1:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST00000138538.8:157 ENSMUST00000130515.8:200 ENSMUST00000182729.7:308 | |all_trans=ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 uc007mbq.1:0 uc007mbr.1:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST00000138538.8:157 ENSMUST00000130515.8:200 ENSMUST00000182729.7:308 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
|end=108425304 | |end=108425304 | ||
| + | |end_of_center_position=108425274 | ||
|entrez_id=76380 | |entrez_id=76380 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=1700001M19Rik | + | |gene_alias=1700001M19Rik |
|gene_description=centrosomal protein 112 | |gene_description=centrosomal protein 112 | ||
|gene_id=76380 | |gene_id=76380 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=108425242 | |start=108425242 | ||
| + | |start_of_center_position=108425273 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 uc007mbq.1 uc007mbr.1 AK160317 | |transcript_name=ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 uc007mbq.1 uc007mbr.1 AK160317 | ||
Revision as of 11:19, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 108425273 |
|---|---|
| End of the center position in the TSS region: | 108425274 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 uc007mbq.1 uc007mbr.1 AK160317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 uc007mbq.1:0 uc007mbr.1:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST00000138538.8:157 ENSMUST00000130515.8:200 ENSMUST00000182729.7:308 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_029606 |
| Entrez ID: | 76380 |
| Nearest Unigene: | Mm.344071 |
| Nearest Refseq: | NM_029586 |
| Nearest Ensembl: | ENSMUSG00000020728 |
| Gene Name: | centrosomal protein 112 |
| Gene Alias: | 1700001M19Rik |
| Gene Description: | centrosomal protein 112 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
