Difference between revisions of "TSS:Mm 99821.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC048677:-7 AK006504:-20 ENSMUST00000106724.9:-26 NM_029586:-26 AK005611:-26 ENSMUST00000106715.7:-35 NM_145688:-35 uc007mbs.1:-35 uc007mbt.1:-35 ENSMUS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |1700029K01Rik= | ||
| + | |8430407H02Rik= | ||
| + | |AV043680= | ||
| + | |AV207351= | ||
| + | |Ccdc46= | ||
| + | |Macoco= | ||
|all_trans=BC048677:-7 AK006504:-20 ENSMUST00000106724.9:-26 NM_029586:-26 AK005611:-26 ENSMUST00000106715.7:-35 NM_145688:-35 uc007mbs.1:-35 uc007mbt.1:-35 ENSMUST00000106718.9:-42 | |all_trans=BC048677:-7 AK006504:-20 ENSMUST00000106724.9:-26 NM_029586:-26 AK005611:-26 ENSMUST00000106715.7:-35 NM_145688:-35 uc007mbs.1:-35 uc007mbt.1:-35 ENSMUST00000106718.9:-42 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=30 | |distance_to_tss=30 | ||
|end=108682652 | |end=108682652 | ||
| + | |end_of_center_position=108682648 | ||
|entrez_id=76380 | |entrez_id=76380 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=1700001M19Rik | + | |gene_alias=1700001M19Rik |
|gene_description=centrosomal protein 112 | |gene_description=centrosomal protein 112 | ||
|gene_id=76380 | |gene_id=76380 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=108682643 | |start=108682643 | ||
| + | |start_of_center_position=108682647 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC048677 | |transcript_name=BC048677 | ||
Revision as of 11:19, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 108682647 |
|---|---|
| End of the center position in the TSS region: | 108682648 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC048677 |
|---|---|
| Distance: | -7 |
| Num_trans: | 10 |
| All_trans: | BC048677:-7 AK006504:-20 ENSMUST00000106724.9:-26 NM_029586:-26 AK005611:-26 ENSMUST00000106715.7:-35 NM_145688:-35 uc007mbs.1:-35 uc007mbt.1:-35 ENSMUST00000106718.9:-42 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_029586 |
| Entrez ID: | 76380 |
| Nearest Unigene: | Mm.344071 |
| Nearest Refseq: | NM_029586 |
| Nearest Ensembl: | ENSMUSG00000020728 |
| Gene Name: | centrosomal protein 112 |
| Gene Alias: | 1700001M19Rik |
| Gene Description: | centrosomal protein 112 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
