Difference between revisions of "TSS:Mm 99852.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |AU043124= | ||
| + | |Galpha13= | ||
|all_trans=AK149766:0 BC057665:33 M63660:-38 ENSMUST00000106702.3:-53 ENSMUST00000020930.13:-53 AK011851:-53 NM_010303:-90 uc007mcd.1:-90 uc007mce.1:-90 BC049898:173 | |all_trans=AK149766:0 BC057665:33 M63660:-38 ENSMUST00000106702.3:-53 ENSMUST00000020930.13:-53 AK011851:-53 NM_010303:-90 uc007mcd.1:-90 uc007mce.1:-90 BC049898:173 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=101 | |distance_to_tss=101 | ||
|end=109362907 | |end=109362907 | ||
| + | |end_of_center_position=109362896 | ||
|entrez_id=14674 | |entrez_id=14674 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=AU024132 | + | |gene_alias=AU024132 |
|gene_description="guanine nucleotide binding protein, alpha 13" | |gene_description="guanine nucleotide binding protein, alpha 13" | ||
|gene_id=14674 | |gene_id=14674 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=109362883 | |start=109362883 | ||
| + | |start_of_center_position=109362895 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK149766 | |transcript_name=AK149766 | ||
Revision as of 11:24, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109362895 |
|---|---|
| End of the center position in the TSS region: | 109362896 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK149766 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK149766:0 BC057665:33 M63660:-38 ENSMUST00000106702.3:-53 ENSMUST00000020930.13:-53 AK011851:-53 NM_010303:-90 uc007mcd.1:-90 uc007mce.1:-90 BC049898:173 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_010303 |
| Entrez ID: | 14674 |
| Nearest Unigene: | Mm.193925 |
| Nearest Refseq: | NM_010303 |
| Nearest Ensembl: | ENSMUSG00000020611 |
| Gene Name: | "guanine nucleotide binding protein, alpha 13" |
| Gene Alias: | AU024132 |
| Gene Description: | "guanine nucleotide binding protein, alpha 13" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
