Difference between revisions of "TSS:Mm 99897.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK151124:0 AK153227:0 BC005697:4 ENSMUST00000106676.7:21 AK146380:-22 AK150427:-26 AK049832:-27 uc029rpm.1:-94 HQ412668:-94 ENSMUST00000049527.6:367 NM_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RIalpha= | ||
| + | |Tse-1= | ||
| + | |Tse1= | ||
|all_trans=AK151124:0 AK153227:0 BC005697:4 ENSMUST00000106676.7:21 AK146380:-22 AK150427:-26 AK049832:-27 uc029rpm.1:-94 HQ412668:-94 ENSMUST00000049527.6:367 NM_021880:367 NM_001313976:367 NM_001313975:367 uc007mct.2:-372 AK158562:-372 uc007mcu.1:395 AK005039:395 AK053918:395 AK145797:395 AK051068:395 AK147188:407 AK083383:415 AK145860:428 AK027916:428 BC003461:436 | |all_trans=AK151124:0 AK153227:0 BC005697:4 ENSMUST00000106676.7:21 AK146380:-22 AK150427:-26 AK049832:-27 uc029rpm.1:-94 HQ412668:-94 ENSMUST00000049527.6:367 NM_021880:367 NM_001313976:367 NM_001313975:367 uc007mct.2:-372 AK158562:-372 uc007mcu.1:395 AK005039:395 AK053918:395 AK145797:395 AK051068:395 AK147188:407 AK083383:415 AK145860:428 AK027916:428 BC003461:436 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-377 | |distance_to_tss=-377 | ||
|end=109650554 | |end=109650554 | ||
| + | |end_of_center_position=109650545 | ||
|entrez_id=19084 | |entrez_id=19084 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=1300018C22Rik | + | |gene_alias=1300018C22Rik |
|gene_description="protein kinase, cAMP dependent regulatory, type I, alpha" | |gene_description="protein kinase, cAMP dependent regulatory, type I, alpha" | ||
|gene_id=19084 | |gene_id=19084 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=109650534 | |start=109650534 | ||
| + | |start_of_center_position=109650544 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK151124 AK153227 | |transcript_name=AK151124 AK153227 | ||
Revision as of 11:30, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109650544 |
|---|---|
| End of the center position in the TSS region: | 109650545 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK151124 AK153227 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | AK151124:0 AK153227:0 BC005697:4 ENSMUST00000106676.7:21 AK146380:-22 AK150427:-26 AK049832:-27 uc029rpm.1:-94 HQ412668:-94 ENSMUST00000049527.6:367 NM_021880:367 NM_001313976:367 NM_001313975:367 uc007mct.2:-372 AK158562:-372 uc007mcu.1:395 AK005039:395 AK053918:395 AK145797:395 AK051068:395 AK147188:407 AK083383:415 AK145860:428 AK027916:428 BC003461:436 |
TATA-Box annotation
| Distance to TSS: | -377 |
|---|---|
| Nearest PromoterID: | NM_021880 |
| Entrez ID: | 19084 |
| Nearest Unigene: | Mm.30039 |
| Nearest Refseq: | NM_021880 |
| Nearest Ensembl: | ENSMUSG00000020612 |
| Gene Name: | "protein kinase, cAMP dependent regulatory, type I, alpha" |
| Gene Alias: | 1300018C22Rik |
| Gene Description: | "protein kinase, cAMP dependent regulatory, type I, alpha" |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
