Difference between revisions of "TSS:Mm 99931.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK045447:-12 AK140249:-19 AK032192:-24 ENSMUST00000106635.1:-58 NM_001252209:-58 uc007mdv.3:-58 |chr=chr11 |cpg_percent=0.015 |distance=-12 |distance_to...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI132396= | ||
| + | |Kir5.1= | ||
|all_trans=AK045447:-12 AK140249:-19 AK032192:-24 ENSMUST00000106635.1:-58 NM_001252209:-58 uc007mdv.3:-58 | |all_trans=AK045447:-12 AK140249:-19 AK032192:-24 ENSMUST00000106635.1:-58 NM_001252209:-58 uc007mdv.3:-58 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=110997552 | |end=110997552 | ||
| + | |end_of_center_position=110997549 | ||
|entrez_id=16517 | |entrez_id=16517 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=6430410F18Rik | + | |gene_alias=6430410F18Rik |
|gene_description="potassium inwardly-rectifying channel, subfamily J, member 16" | |gene_description="potassium inwardly-rectifying channel, subfamily J, member 16" | ||
|gene_id=16517 | |gene_id=16517 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=110997544 | |start=110997544 | ||
| + | |start_of_center_position=110997548 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK045447 | |transcript_name=AK045447 | ||
Revision as of 11:35, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 110997548 |
|---|---|
| End of the center position in the TSS region: | 110997549 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK045447 |
|---|---|
| Distance: | -12 |
| Num_trans: | 6 |
| All_trans: | AK045447:-12 AK140249:-19 AK032192:-24 ENSMUST00000106635.1:-58 NM_001252209:-58 uc007mdv.3:-58 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_001252209 |
| Entrez ID: | 16517 |
| Nearest Unigene: | Mm.30176 |
| Nearest Refseq: | NM_010604 |
| Nearest Ensembl: | ENSMUSG00000051497 |
| Gene Name: | "potassium inwardly-rectifying channel, subfamily J, member 16" |
| Gene Alias: | 6430410F18Rik |
| Gene Description: | "potassium inwardly-rectifying channel, subfamily J, member 16" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
