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Difference between revisions of "TSS:Hg 187497.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000217455.8:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|NAP1=
 +
|PTE-1=
 +
|PTE-2=
 +
|PTE1=
 +
|PTE2=
 
|all_trans=ENST00000217455.8:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481938.5:0 NM_005469:0 uc002xqa.3:0 uc061xjn.1:0 uc061xjo.1:0 uc061xjr.1:0 uc010zxf.3:0 uc061xjs.1:0 uc061xjt.1:0 uc061xjv.1:0 X86032:0 AK056668:0 AK298783:0 AK296973:0 AK292494:0 AF014404:9 BC117157:17 BC117155:17 HQ258192:39 KJ892892:39 AF124264:39 CR541771:39 CR541778:39 ENST00000426915.1:45 uc061xjx.1:45 ENST00000457981.5:158 uc061xjw.1:158
 
|all_trans=ENST00000217455.8:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481938.5:0 NM_005469:0 uc002xqa.3:0 uc061xjn.1:0 uc061xjo.1:0 uc061xjr.1:0 uc010zxf.3:0 uc061xjs.1:0 uc061xjt.1:0 uc061xjv.1:0 X86032:0 AK056668:0 AK298783:0 AK296973:0 AK292494:0 AF014404:9 BC117157:17 BC117155:17 HQ258192:39 KJ892892:39 AF124264:39 CR541771:39 CR541778:39 ENST00000426915.1:45 uc061xjx.1:45 ENST00000457981.5:158 uc061xjw.1:158
 
|chr=chr20
 
|chr=chr20
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|distance_to_tss=24
 
|distance_to_tss=24
 
|end=45857417
 
|end=45857417
 +
|end_of_center_position=45857386
 
|entrez_id=10005
 
|entrez_id=10005
 
|gc_percent=0.597015
 
|gc_percent=0.597015
−
|gene_alias=HNAACTE|NAP1|PTE-1|PTE-2|PTE1|PTE2|hACTE-III|hTE
+
|gene_alias=HNAACTE
 
|gene_description=acyl-CoA thioesterase 8
 
|gene_description=acyl-CoA thioesterase 8
 
|gene_id=10005
 
|gene_id=10005
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|gene_synonyms=NAP1 PTE-2 hACTE-III hTE
 
|gene_synonyms=NAP1 PTE-2 hACTE-III hTE
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hACTE-III=
 +
|hTE=
 
|hgnc_mgi_id=HGNC:15919
 
|hgnc_mgi_id=HGNC:15919
 
|nearest_ensembl=ENSG00000101473
 
|nearest_ensembl=ENSG00000101473
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|species=human
 
|species=human
 
|start=45857353
 
|start=45857353
 +
|start_of_center_position=45857385
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000217455.8 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 uc002xqa.3 uc061xjn.1 uc061xjo.1 uc061xjr.1 uc010zxf.3 uc061xjs.1 uc061xjt.1 uc061xjv.1 X86032 AK056668 AK298783 AK296973 AK292494
 
|transcript_name=ENST00000217455.8 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 uc002xqa.3 uc061xjn.1 uc061xjo.1 uc061xjr.1 uc010zxf.3 uc061xjs.1 uc061xjt.1 uc061xjv.1 X86032 AK056668 AK298783 AK296973 AK292494

Revision as of 11:36, 12 May 2019

Basic information about the TSS

TSS ID:hg_187497.1
Species:human
Chr:chr20
TSS Classification:yes
Start:45857353
End:45857417
Strand:-
TSS Score:1
Start of the center position in the TSS region:45857385
End of the center position in the TSS region:45857386



Gene and protein annotation

Transcript_name:ENST00000217455.8 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 uc002xqa.3 uc061xjn.1 uc061xjo.1 uc061xjr.1 uc010zxf.3 uc061xjs.1 uc061xjt.1 uc061xjv.1 X86032 AK056668 AK298783 AK296973 AK292494
Distance:0
GeneID:10005
HGNC/MGI_ID:HGNC:15919
UniProt_ID:B4DLF4 B4DQG0 E9PIS4 E9PJN0 E9PMC4 E9PRD4 F6VBM3 O14734
Gene_name:acyl-CoA thioesterase 8
Gene_symbol:ACOT8
Gene_synonyms:NAP1 PTE-2 hACTE-III hTE
Gene_source:HGNC:15919



Transcript annotation

Transcript_name:ENST00000217455.8 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 uc002xqa.3 uc061xjn.1 uc061xjo.1 uc061xjr.1 uc010zxf.3 uc061xjs.1 uc061xjt.1 uc061xjv.1 X86032 AK056668 AK298783 AK296973 AK292494
Distance:0
Num_trans:34
All_trans:ENST00000217455.8:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481938.5:0 NM_005469:0 uc002xqa.3:0 uc061xjn.1:0 uc061xjo.1:0 uc061xjr.1:0 uc010zxf.3:0 uc061xjs.1:0 uc061xjt.1:0 uc061xjv.1:0 X86032:0 AK056668:0 AK298783:0 AK296973:0 AK292494:0 AF014404:9 BC117157:17 BC117155:17 HQ258192:39 KJ892892:39 AF124264:39 CR541771:39 CR541778:39 ENST00000426915.1:45 uc061xjx.1:45 ENST00000457981.5:158 uc061xjw.1:158



TATA-Box annotation

Distance to TSS:24
Nearest PromoterID:NM_005469
Entrez ID:10005
Nearest Unigene:Hs.444776
Nearest Refseq:NM_005469
Nearest Ensembl:ENSG00000101473
Gene Name:acyl-CoA thioesterase 8
Gene Alias:HNAACTE
Gene Description:acyl-CoA thioesterase 8
Gene Type:protein-coding
CpG%:0.055
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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