Difference between revisions of "TSS:Mm 99951.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK008535:48 |chr=chr11 |cpg_percent=0.005 |distance=48 |distance_to_tss=4662 |end=112786877 |entrez_id=20682 |gc_percent=0.273632 |gene_alias=2010306G03...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AV220920= | ||
|all_trans=AK008535:48 | |all_trans=AK008535:48 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=4662 | |distance_to_tss=4662 | ||
|end=112786877 | |end=112786877 | ||
| + | |end_of_center_position=112786873 | ||
|entrez_id=20682 | |entrez_id=20682 | ||
|gc_percent=0.273632 | |gc_percent=0.273632 | ||
| − | |gene_alias=2010306G03Rik | + | |gene_alias=2010306G03Rik |
|gene_description=SRY (sex determining region Y)-box 9 | |gene_description=SRY (sex determining region Y)-box 9 | ||
|gene_id=20682 | |gene_id=20682 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:98371 | |hgnc_mgi_id=MGI:98371 | ||
| + | |mKIAA4243= | ||
|nearest_ensembl=ENSMUSG00000000567 | |nearest_ensembl=ENSMUSG00000000567 | ||
|nearest_promoter_id=NM_011448 | |nearest_promoter_id=NM_011448 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=112786867 | |start=112786867 | ||
| + | |start_of_center_position=112786872 | ||
|strand=+ | |strand=+ | ||
|tata_box="4(CTGTCTTTAAGG,-,0.00)" | |tata_box="4(CTGTCTTTAAGG,-,0.00)" | ||
Revision as of 11:38, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 112786872 |
|---|---|
| End of the center position in the TSS region: | 112786873 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK008535 |
|---|---|
| Distance: | 48 |
| Num_trans: | 1 |
| All_trans: | AK008535:48 |
TATA-Box annotation
| Distance to TSS: | 4662 |
|---|---|
| Nearest PromoterID: | NM_011448 |
| Entrez ID: | 20682 |
| Nearest Unigene: | Mm.286407 |
| Nearest Refseq: | NM_011448 |
| Nearest Ensembl: | ENSMUSG00000000567 |
| Gene Name: | SRY (sex determining region Y)-box 9 |
| Gene Alias: | 2010306G03Rik |
| Gene Description: | SRY (sex determining region Y)-box 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.273632 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "4(CTGTCTTTAAGG,-,0.00)" |
