Difference between revisions of "TSS:Mm 99989.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK003193:-16 |chr=chr11 |cpg_percent=0.015 |distance=-16 |distance_to_tss=-7014 |end=114720400 |entrez_id=432611 |gc_percent=0.447761 |gene_alias=C03001...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Dnai2= | ||
| + | |Gm728= | ||
|all_trans=AK003193:-16 | |all_trans=AK003193:-16 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-7014 | |distance_to_tss=-7014 | ||
|end=114720400 | |end=114720400 | ||
| + | |end_of_center_position=114720398 | ||
|entrez_id=432611 | |entrez_id=432611 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=C030015H18Rik | + | |gene_alias=C030015H18Rik |
|gene_description="dynein, axonemal, intermediate chain 2" | |gene_description="dynein, axonemal, intermediate chain 2" | ||
|gene_id=117160 | |gene_id=117160 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=114720395 | |start=114720395 | ||
| + | |start_of_center_position=114720397 | ||
|strand=+ | |strand=+ | ||
|tata_box="53(GCCTTGTAAAGG,-,0.00)" | |tata_box="53(GCCTTGTAAAGG,-,0.00)" | ||
Revision as of 11:45, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 114720397 |
|---|---|
| End of the center position in the TSS region: | 114720398 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK003193 |
|---|---|
| Distance: | -16 |
| Num_trans: | 1 |
| All_trans: | AK003193:-16 |
TATA-Box annotation
| Distance to TSS: | -7014 |
|---|---|
| Nearest PromoterID: | NM_001034878 |
| Entrez ID: | 432611 |
| Nearest Unigene: | Mm.212764 |
| Nearest Refseq: | NM_001034878 |
| Nearest Ensembl: | ENSMUSG00000034706 |
| Gene Name: | tweety family member 2 |
| Gene Alias: | C030015H18Rik |
| Gene Description: | "dynein, axonemal, intermediate chain 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "53(GCCTTGTAAAGG,-,0.00)" |
