Difference between revisions of "TSS:Mm 100019.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY457054:-13 AK053160:-24 AB065156:-56 AB091766:-59 AB091765:-75 ENSMUST00000153245.1:-84 AB095675:-159 BC139296:-273 BC139297:-273 ENSMUST00000106582.8...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Clm8= | ||
| + | |LMIR1= | ||
| + | |MAIR-I= | ||
| + | |MAIR-Ia= | ||
| + | |MMAC8= | ||
| + | |Pigr4= | ||
|all_trans=AY457054:-13 AK053160:-24 AB065156:-56 AB091766:-59 AB091765:-75 ENSMUST00000153245.1:-84 AB095675:-159 BC139296:-273 BC139297:-273 ENSMUST00000106582.8:-337 ENSMUST00000045151.5:-337 NM_170758:-337 uc007mfy.1:-337 uc007mfz.1:-337 AK045869:-337 | |all_trans=AY457054:-13 AK053160:-24 AB065156:-56 AB091766:-59 AB091765:-75 ENSMUST00000153245.1:-84 AB095675:-159 BC139296:-273 BC139297:-273 ENSMUST00000106582.8:-337 ENSMUST00000045151.5:-337 NM_170758:-337 uc007mfy.1:-337 uc007mfz.1:-337 AK045869:-337 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=341 | |distance_to_tss=341 | ||
|end=114890386 | |end=114890386 | ||
| + | |end_of_center_position=114890382 | ||
|entrez_id=217303 | |entrez_id=217303 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=B230315M08Rik | + | |gene_alias=B230315M08Rik |
|gene_description=CD300A molecule | |gene_description=CD300A molecule | ||
|gene_id=217303 | |gene_id=217303 | ||
| Line 17: | Line 24: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2443411 | |hgnc_mgi_id=MGI:2443411 | ||
| + | |mcpir1= | ||
|nearest_ensembl=ENSMUSG00000034652 | |nearest_ensembl=ENSMUSG00000034652 | ||
|nearest_promoter_id=NM_170758 | |nearest_promoter_id=NM_170758 | ||
| Line 24: | Line 32: | ||
|species=mouse | |species=mouse | ||
|start=114890377 | |start=114890377 | ||
| + | |start_of_center_position=114890381 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY457054 | |transcript_name=AY457054 | ||
Revision as of 11:48, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114890381 |
|---|---|
| End of the center position in the TSS region: | 114890382 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY457054 |
|---|---|
| Distance: | -13 |
| Num_trans: | 15 |
| All_trans: | AY457054:-13 AK053160:-24 AB065156:-56 AB091766:-59 AB091765:-75 ENSMUST00000153245.1:-84 AB095675:-159 BC139296:-273 BC139297:-273 ENSMUST00000106582.8:-337 ENSMUST00000045151.5:-337 NM_170758:-337 uc007mfy.1:-337 uc007mfz.1:-337 AK045869:-337 |
TATA-Box annotation
| Distance to TSS: | 341 |
|---|---|
| Nearest PromoterID: | NM_170758 |
| Entrez ID: | 217303 |
| Nearest Unigene: | Mm.294439 |
| Nearest Refseq: | NM_170758 |
| Nearest Ensembl: | ENSMUSG00000034652 |
| Gene Name: | CD300A antigen |
| Gene Alias: | B230315M08Rik |
| Gene Description: | CD300A molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
