Difference between revisions of "TSS:Mm 100248.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000153668.7:-9 |chr=chr11 |cpg_percent=0.02 |distance=-9 |distance_to_tss=-23542 |end=117308184 |entrez_id=53860 |gc_percent=0.606965 |gene_ali...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Msf= | ||
| + | |PNUTL4= | ||
| + | |Sint1= | ||
|all_trans=ENSMUST00000153668.7:-9 | |all_trans=ENSMUST00000153668.7:-9 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-23542 | |distance_to_tss=-23542 | ||
|end=117308184 | |end=117308184 | ||
| + | |end_of_center_position=117308174 | ||
|entrez_id=53860 | |entrez_id=53860 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=MSF1 | + | |gene_alias=MSF1 |
|gene_description=septin 9 | |gene_description=septin 9 | ||
|gene_id=53860 | |gene_id=53860 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=117308162 | |start=117308162 | ||
| + | |start_of_center_position=117308173 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000153668.7 | |transcript_name=ENSMUST00000153668.7 | ||
Revision as of 12:33, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117308173 |
|---|---|
| End of the center position in the TSS region: | 117308174 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000153668.7 |
|---|---|
| Distance: | -9 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000153668.7:-9 |
TATA-Box annotation
| Distance to TSS: | -23542 |
|---|---|
| Nearest PromoterID: | NM_017380 |
| Entrez ID: | 53860 |
| Nearest Unigene: | Mm.38450 |
| Nearest Refseq: | NM_017380 |
| Nearest Ensembl: | ENSMUSG00000059248 |
| Gene Name: | septin 9 |
| Gene Alias: | MSF1 |
| Gene Description: | septin 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
