Difference between revisions of "TSS:Mm 163285.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK147471:0 ENSMUST00000106344.7:72 ENSMUST00000141115.7:-149 AK147551:-149 uc007mnj.2:224 ENSMUST00000026658.12:-433 NM_198022:-433 uc007mni.2:-433 |chr...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=442 | |distance_to_tss=442 | ||
|end=117654741 | |end=117654741 | ||
| + | |end_of_center_position=117654732 | ||
|entrez_id=217351 | |entrez_id=217351 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=9930033H14Rik | + | |gene_alias=9930033H14Rik |
|gene_description=trinucleotide repeat containing 6C | |gene_description=trinucleotide repeat containing 6C | ||
|gene_id=217351 | |gene_id=217351 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2443265 | |hgnc_mgi_id=MGI:2443265 | ||
| + | |mKIAA1582= | ||
|nearest_ensembl=ENSMUSG00000025571 | |nearest_ensembl=ENSMUSG00000025571 | ||
|nearest_promoter_id=NM_198022 | |nearest_promoter_id=NM_198022 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=117654721 | |start=117654721 | ||
| + | |start_of_center_position=117654731 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK147471 | |transcript_name=AK147471 | ||
Revision as of 12:35, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117654731 |
|---|---|
| End of the center position in the TSS region: | 117654732 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK147471 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | AK147471:0 ENSMUST00000106344.7:72 ENSMUST00000141115.7:-149 AK147551:-149 uc007mnj.2:224 ENSMUST00000026658.12:-433 NM_198022:-433 uc007mni.2:-433 |
TATA-Box annotation
| Distance to TSS: | 442 |
|---|---|
| Nearest PromoterID: | NM_198022 |
| Entrez ID: | 217351 |
| Nearest Unigene: | Mm.40272 |
| Nearest Refseq: | NM_198022 |
| Nearest Ensembl: | ENSMUSG00000025571 |
| Gene Name: | trinucleotide repeat containing 6C |
| Gene Alias: | 9930033H14Rik |
| Gene Description: | trinucleotide repeat containing 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
