Difference between revisions of "TSS:Mm 161009.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CTRP1= | ||
| + | |Zsig37= | ||
|all_trans=ENSMUST00000133558.2:67 NM_001204130:130 uc011yio.1:130 AK145104:130 BC037636:286 DQ002394:292 | |all_trans=ENSMUST00000133558.2:67 NM_001204130:130 uc011yio.1:130 AK145104:130 BC037636:286 DQ002394:292 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=-130 | |distance_to_tss=-130 | ||
|end=118443404 | |end=118443404 | ||
| + | |end_of_center_position=118443404 | ||
|entrez_id=56745 | |entrez_id=56745 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=1600017K21Rik | + | |gene_alias=1600017K21Rik |
|gene_description=C1q and tumor necrosis factor related protein 1 | |gene_description=C1q and tumor necrosis factor related protein 1 | ||
|gene_id=56745 | |gene_id=56745 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=118443403 | |start=118443403 | ||
| + | |start_of_center_position=118443403 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000133558.2 | |transcript_name=ENSMUST00000133558.2 | ||
Revision as of 12:54, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 118443403 |
|---|---|
| End of the center position in the TSS region: | 118443404 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000133558.2 |
|---|---|
| Distance: | 67 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000133558.2:67 NM_001204130:130 uc011yio.1:130 AK145104:130 BC037636:286 DQ002394:292 |
TATA-Box annotation
| Distance to TSS: | -130 |
|---|---|
| Nearest PromoterID: | NM_001204130 |
| Entrez ID: | 56745 |
| Nearest Unigene: | Mm.23845 |
| Nearest Refseq: | NM_019959 |
| Nearest Ensembl: | ENSMUSG00000017446 |
| Gene Name: | C1q and tumor necrosis factor related protein 1 |
| Gene Alias: | 1600017K21Rik |
| Gene Description: | C1q and tumor necrosis factor related protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
