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Difference between revisions of "TSS:Mm 100533.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000061309.4:3 AB085945:7 BC134361:7 ENSMUST00000106194.7:-16 ENSMUST00000106195.2:-16 NM_153288:-16 uc007mto.1:-16 AK141698:-16 |chr=chr11 |cpg...")
 
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|distance_to_tss=20
 
|distance_to_tss=20
 
|end=120608502
 
|end=120608502
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|end_of_center_position=120608498
 
|entrez_id=208990
 
|entrez_id=208990
 
|gc_percent=0.666667
 
|gc_percent=0.666667
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|species=mouse
 
|species=mouse
 
|start=120608492
 
|start=120608492
 +
|start_of_center_position=120608497
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000061309.4
 
|transcript_name=ENSMUST00000061309.4

Revision as of 13:21, 12 May 2019

Basic information about the TSS


TSS ID:mm_100533.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120608492
End:120608502
Strand:+
TSS Score:1
Start of the center position in the TSS region:120608497
End of the center position in the TSS region:120608498



Gene and protein annotation


Transcript_name:ENSMUST00000061309.4
Distance:3
GeneID:208990
HGNC/MGI_ID:MGI:2387153
UniProt_ID:A2ABY2
Gene_name:neuropeptide B
Gene_symbol:Npb
Gene_synonyms:
Gene_source:MGI:2387153



Transcript annotation


Transcript_name:ENSMUST00000061309.4
Distance:3
Num_trans:8
All_trans:ENSMUST00000061309.4:3 AB085945:7 BC134361:7 ENSMUST00000106194.7:-16 ENSMUST00000106195.2:-16 NM_153288:-16 uc007mto.1:-16 AK141698:-16



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NM_001347616
Entrez ID:208990
Nearest Unigene:Mm.29444
Nearest Refseq:NM_153288
Nearest Ensembl:ENSMUSG00000044034
Gene Name:neuropeptide B
Gene Alias:-
Gene Description:neuropeptide B
Gene Type:protein-coding
CpG%:0.065
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):