Difference between revisions of "TSS:Hg 121706.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=85719350 | |end=85719350 | ||
| + | |end_of_center_position=85719332 | ||
|entrez_id=54843 | |entrez_id=54843 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=CHR11SYT | + | |gene_alias=CHR11SYT |
|gene_description=synaptotagmin like 2 | |gene_description=synaptotagmin like 2 | ||
|gene_id=54843 | |gene_id=54843 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=85719313 | |start=85719313 | ||
| + | |start_of_center_position=85719331 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_206930 NM_001289609 NM_001162952 | |transcript_name=NM_206930 NM_001289609 NM_001162952 | ||
Revision as of 21:38, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 85719331 |
|---|---|
| End of the center position in the TSS region: | 85719332 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_206930 NM_001289609 NM_001162952 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | NM_206930:0 NM_001289609:0 NM_001162952:0 ENST00000526999.5:-27 uc058gei.1:-27 ENST00000527794.5:86 uc058gef.1:86 ENST00000534554.1:134 NM_001289610:134 NM_206929:134 uc058gem.1:134 ENST00000389958.7:146 ENST00000528566.1:146 uc001pay.5:146 uc058gen.1:146 AK092121:146 ENST00000533577.1:164 uc058gel.1:164 ENST00000529581.5:176 uc001pax.5:176 AK074737:176 ENST00000533892.5:216 uc010rte.4:216 AK298604:216 ENST00000533057.6:232 uc058gee.1:232 ENST00000532995.5:239 uc058gdv.1:239 BC068495:239 uc058geh.1:258 BC110315:435 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001162952 |
| Entrez ID: | 54843 |
| Nearest Unigene: | Hs.369520 |
| Nearest Refseq: | NM_032379 |
| Nearest Ensembl: | ENSG00000137501 |
| Gene Name: | synaptotagmin like 2 |
| Gene Alias: | CHR11SYT |
| Gene Description: | synaptotagmin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
