Difference between revisions of "TSS:Hg 40837.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000414938.1:24 NR_004428:24 uc003bqd.4:24 BC039547:24 |chr=chr3 |cpg_percent=0.005 |distance=24 |distance_to_tss=-31 |end=4751628 |entrez_id=10012...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00190= | ||
|all_trans=ENST00000414938.1:24 NR_004428:24 uc003bqd.4:24 BC039547:24 | |all_trans=ENST00000414938.1:24 NR_004428:24 uc003bqd.4:24 BC039547:24 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-31 | |distance_to_tss=-31 | ||
|end=4751628 | |end=4751628 | ||
| + | |end_of_center_position=4751621 | ||
|entrez_id=100126791 | |entrez_id=100126791 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=EGO | + | |gene_alias=EGO |
|gene_description=eosinophil granule ontogeny transcript (non-protein coding) | |gene_description=eosinophil granule ontogeny transcript (non-protein coding) | ||
|gene_id=100126791 | |gene_id=100126791 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=4751613 | |start=4751613 | ||
| + | |start_of_center_position=4751620 | ||
|strand=- | |strand=- | ||
|tata_box="60(GGCTTTTTAAAA,-,0.00)" | |tata_box="60(GGCTTTTTAAAA,-,0.00)" | ||
Revision as of 23:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 4751620 |
|---|---|
| End of the center position in the TSS region: | 4751621 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000414938.1 NR_004428 uc003bqd.4 BC039547 |
|---|---|
| Distance: | 24 |
| Num_trans: | 4 |
| All_trans: | ENST00000414938.1:24 NR_004428:24 uc003bqd.4:24 BC039547:24 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NR_004428 |
| Entrez ID: | 100126791 |
| Nearest Unigene: | Hs.663059 |
| Nearest Refseq: | NR_004428 |
| Nearest Ensembl: | ENSG00000235947 |
| Gene Name: | eosinophil granule ontogeny transcript (non-protein coding) |
| Gene Alias: | EGO |
| Gene Description: | eosinophil granule ontogeny transcript (non-protein coding) |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "60(GGCTTTTTAAAA,-,0.00)" |
