Difference between revisions of "TSS:Mm 60060.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000190947.1:253 NR_046062:253 uc009gih.1:253 AK133438:253 |chr=chr7 |cpg_percent=0.005 |distance=253 |distance_to_tss=-257 |end=31162105 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ENSMUSG00000074193= | ||
|all_trans=ENSMUST00000190947.1:253 NR_046062:253 uc009gih.1:253 AK133438:253 | |all_trans=ENSMUST00000190947.1:253 NR_046062:253 uc009gih.1:253 AK133438:253 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-257 | |distance_to_tss=-257 | ||
|end=31162105 | |end=31162105 | ||
| + | |end_of_center_position=31162102 | ||
|entrez_id=100038516 | |entrez_id=100038516 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=EG668322 | + | |gene_alias=EG668322 |
|gene_description=predicted gene 10640 | |gene_description=predicted gene 10640 | ||
|gene_id=100038516 | |gene_id=100038516 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=31162097 | |start=31162097 | ||
| + | |start_of_center_position=31162101 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000190947.1 NR_046062 uc009gih.1 AK133438 | |transcript_name=ENSMUST00000190947.1 NR_046062 uc009gih.1 AK133438 | ||
Revision as of 23:41, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 31162101 |
|---|---|
| End of the center position in the TSS region: | 31162102 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000190947.1 NR_046062 uc009gih.1 AK133438 |
|---|---|
| Distance: | 253 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000190947.1:253 NR_046062:253 uc009gih.1:253 AK133438:253 |
TATA-Box annotation
| Distance to TSS: | -257 |
|---|---|
| Nearest PromoterID: | NR_046062 |
| Entrez ID: | 100038516 |
| Nearest Unigene: | Mm.387223 |
| Nearest Refseq: | NR_046062 |
| Nearest Ensembl: | ENSMUSG00000100985 |
| Gene Name: | predicted gene 10640 |
| Gene Alias: | EG668322 |
| Gene Description: | predicted gene 10640 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
