Difference between revisions of "TSS:Hg 217979.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001195279:22 ENST00000561645.2:-36 uc062gvp.1:-36 ENST00000564146.3:-70 uc021wtc.2:-70 |chr=chr3 |cpg_percent=0.025 |distance=22 |distance_to_tss=-22...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MKRN2-AS1= | ||
|all_trans=NM_001195279:22 ENST00000561645.2:-36 uc062gvp.1:-36 ENST00000564146.3:-70 uc021wtc.2:-70 | |all_trans=NM_001195279:22 ENST00000561645.2:-36 uc062gvp.1:-36 ENST00000564146.3:-70 uc021wtc.2:-70 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=12545486 | |end=12545486 | ||
| + | |end_of_center_position=12545486 | ||
|entrez_id=100129480 | |entrez_id=100129480 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=C3orf83 | + | |gene_alias=C3orf83 |
|gene_description=MKRN2 opposite strand | |gene_description=MKRN2 opposite strand | ||
|gene_id=100129480 | |gene_id=100129480 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=12545485 | |start=12545485 | ||
| + | |start_of_center_position=12545485 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001195279 | |transcript_name=NM_001195279 | ||
Revision as of 00:18, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 12545485 |
|---|---|
| End of the center position in the TSS region: | 12545486 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001195279 |
|---|---|
| Distance: | 22 |
| Num_trans: | 5 |
| All_trans: | NM_001195279:22 ENST00000561645.2:-36 uc062gvp.1:-36 ENST00000564146.3:-70 uc021wtc.2:-70 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001195279 |
| Entrez ID: | 100129480 |
| Nearest Unigene: | Hs.572974 |
| Nearest Refseq: | NM_001195279 |
| Nearest Ensembl: | ENSG00000225526 |
| Gene Name: | MKRN2 opposite strand |
| Gene Alias: | C3orf83 |
| Gene Description: | MKRN2 opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
