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Difference between revisions of "TSS:Hg 136493.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000471771.5:-1 uc058wbe.1:-1 ENST00000461838.5:-91 uc058wbc.1:-91 ENST00000485959.5:-103 uc058wbh.1:-103 ENST00000493719.5:-124 uc058wbf.1:-124 BC...")
 
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|distance_to_tss=154
 
|distance_to_tss=154
 
|end=27450040
 
|end=27450040
 +
|end_of_center_position=27450035
 
|entrez_id=219402
 
|entrez_id=219402
 
|gc_percent=0.621891
 
|gc_percent=0.621891
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|species=human
 
|species=human
 
|start=27450029
 
|start=27450029
 +
|start_of_center_position=27450034
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000471771.5 uc058wbe.1
 
|transcript_name=ENST00000471771.5 uc058wbe.1

Revision as of 16:58, 13 May 2019

Basic information about the TSS


TSS ID:hg_136493.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27450029
End:27450040
Strand:-
TSS Score:1
Start of the center position in the TSS region:27450034
End of the center position in the TSS region:27450035



Gene and protein annotation


Transcript_name:ENST00000471771.5 uc058wbe.1
Distance:-1
GeneID:219402
HGNC/MGI_ID:HGNC:29788
UniProt_ID:
Gene_name:mitochondrial translational initiation factor 3
Gene_symbol:MTIF3
Gene_synonyms:IF-3mt IF3(mt)
Gene_source:HGNC:29788



Transcript annotation


Transcript_name:ENST00000471771.5 uc058wbe.1
Distance:-1
Num_trans:16
All_trans:ENST00000471771.5:-1 uc058wbe.1:-1 ENST00000461838.5:-91 uc058wbc.1:-91 ENST00000485959.5:-103 uc058wbh.1:-103 ENST00000493719.5:-124 uc058wbf.1:-124 BC039599:-148 NM_001166262:-149 ENST00000460973.5:-156 uc058wbd.1:-156 NM_001166261:-157 ENST00000464753.1:-159 uc058wbk.1:-159 DQ575760:-255



TATA-Box annotation


Distance to TSS:154
Nearest PromoterID:NM_001166262
Entrez ID:219402
Nearest Unigene:Hs.534582
Nearest Refseq:NM_152912
Nearest Ensembl:ENSG00000122033
Gene Name:mitochondrial translational initiation factor 3
Gene Alias:IF3mt
Gene Description:mitochondrial translational initiation factor 3
Gene Type:protein-coding
CpG%:0.075
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):