Difference between revisions of "TSS:Hg 220999.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000379800.4:-23 NM_145203:-23 uc001uwm.2:-23 BC028723:-23 DQ891231:385 KJ900077:385 KJ905602:385 CU688552:385 DQ894415:385 AB528436:385 |chr=chr13...") |
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|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=37105641 | |end=37105641 | ||
| + | |end_of_center_position=37105641 | ||
|entrez_id=122011 | |entrez_id=122011 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
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|species=human | |species=human | ||
|start=37105640 | |start=37105640 | ||
| + | |start_of_center_position=37105640 | ||
|strand=- | |strand=- | ||
|tata_box="-97(TCTTAAATGGAG,+,0.00)" | |tata_box="-97(TCTTAAATGGAG,+,0.00)" | ||
Revision as of 17:45, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 37105640 |
|---|---|
| End of the center position in the TSS region: | 37105641 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379800.4 NM_145203 uc001uwm.2 BC028723 |
|---|---|
| Distance: | -23 |
| Num_trans: | 10 |
| All_trans: | ENST00000379800.4:-23 NM_145203:-23 uc001uwm.2:-23 BC028723:-23 DQ891231:385 KJ900077:385 KJ905602:385 CU688552:385 DQ894415:385 AB528436:385 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_145203 |
| Entrez ID: | 122011 |
| Nearest Unigene: | Hs.512897 |
| Nearest Refseq: | NM_145203 |
| Nearest Ensembl: | ENSG00000180138 |
| Gene Name: | casein kinase 1 alpha 1 like |
| Gene Alias: | CK1 |
| Gene Description: | casein kinase 1 alpha 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-97(TCTTAAATGGAG,+,0.00)" |
