Difference between revisions of "TSS:Hg 49424.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000602483.5:0 ENST00000602819.5:0 NR_034011:0 NR_034010:0 NR_003584:0 uc062zfe.1:0 uc021xqz.2:0 BC017993:0 BC039555:6 ENST00000602414.5:-41 ENST00...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00060= | ||
|all_trans=ENST00000602483.5:0 ENST00000602819.5:0 NR_034011:0 NR_034010:0 NR_003584:0 uc062zfe.1:0 uc021xqz.2:0 BC017993:0 BC039555:6 ENST00000602414.5:-41 ENST00000602520.5:-41 uc003iby.4:-41 uc021xra.2:-41 ENST00000602573.1:292 uc062zff.1:292 | |all_trans=ENST00000602483.5:0 ENST00000602819.5:0 NR_034011:0 NR_034010:0 NR_003584:0 uc062zfe.1:0 uc021xqz.2:0 BC017993:0 BC039555:6 ENST00000602414.5:-41 ENST00000602520.5:-41 uc003iby.4:-41 uc021xra.2:-41 ENST00000602573.1:292 uc062zff.1:292 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=118278768 | |end=118278768 | ||
| + | |end_of_center_position=118278759 | ||
|entrez_id=100093630 | |entrez_id=100093630 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=LINC00060 | + | |gene_alias=LINC00060 |
|gene_description=small nucleolar RNA host gene 8 | |gene_description=small nucleolar RNA host gene 8 | ||
|gene_id=100093630 | |gene_id=100093630 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=118278749 | |start=118278749 | ||
| + | |start_of_center_position=118278758 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000602483.5 ENST00000602819.5 NR_034011 NR_034010 NR_003584 uc062zfe.1 uc021xqz.2 BC017993 | |transcript_name=ENST00000602483.5 ENST00000602819.5 NR_034011 NR_034010 NR_003584 uc062zfe.1 uc021xqz.2 BC017993 | ||
Revision as of 21:39, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 118278758 |
|---|---|
| End of the center position in the TSS region: | 118278759 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000602483.5 ENST00000602819.5 NR_034011 NR_034010 NR_003584 uc062zfe.1 uc021xqz.2 BC017993 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000602483.5:0 ENST00000602819.5:0 NR_034011:0 NR_034010:0 NR_003584:0 uc062zfe.1:0 uc021xqz.2:0 BC017993:0 BC039555:6 ENST00000602414.5:-41 ENST00000602520.5:-41 uc003iby.4:-41 uc021xra.2:-41 ENST00000602573.1:292 uc062zff.1:292 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NR_003584 |
| Entrez ID: | 100093630 |
| Nearest Unigene: | Hs.535762 |
| Nearest Refseq: | NR_003584 |
| Nearest Ensembl: | ENSG00000269893 |
| Gene Name: | small nucleolar RNA host gene 8 |
| Gene Alias: | LINC00060 |
| Gene Description: | small nucleolar RNA host gene 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
