Personal tools

Difference between revisions of "TSS:Hg 138468.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=BC128030:11 ENST00000326783.3:-20 NM_022360:-20 uc001vyd.3:-20 AY358865:-20 X76386:40 |chr=chr14 |cpg_percent=0 |distance=11 |distance_to_tss=23 |end=20...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|FAM12B=
 +
|HE3-BETA=
 +
|HE3B=
 +
|RAM2=
 
|all_trans=BC128030:11 ENST00000326783.3:-20 NM_022360:-20 uc001vyd.3:-20 AY358865:-20 X76386:40
 
|all_trans=BC128030:11 ENST00000326783.3:-20 NM_022360:-20 uc001vyd.3:-20 AY358865:-20 X76386:40
 
|chr=chr14
 
|chr=chr14
Line 6: Line 10:
 
|distance_to_tss=23
 
|distance_to_tss=23
 
|end=20768453
 
|end=20768453
 +
|end_of_center_position=20768450
 
|entrez_id=64184
 
|entrez_id=64184
 
|gc_percent=0.547264
 
|gc_percent=0.547264
|gene_alias=EP3B|FAM12B|HE3-BETA|HE3B|RAM2
+
|gene_alias=EP3B
 
|gene_description=epididymal protein 3B
 
|gene_description=epididymal protein 3B
 
|gene_id=64184
 
|gene_id=64184
Line 24: Line 29:
 
|species=human
 
|species=human
 
|start=20768446
 
|start=20768446
 +
|start_of_center_position=20768449
 
|strand=+
 
|strand=+
 
|transcript_name=BC128030
 
|transcript_name=BC128030

Revision as of 22:00, 13 May 2019

Basic information about the TSS


TSS ID:hg_138468.1
Species:human
Chr:chr14
TSS Classification:yes
Start:20768446
End:20768453
Strand:+
TSS Score:1
Start of the center position in the TSS region:20768449
End of the center position in the TSS region:20768450



Gene and protein annotation


Transcript_name:BC128030
Distance:11
GeneID:64184
HGNC/MGI_ID:HGNC:19223
UniProt_ID:
Gene_name:epididymal protein 3B
Gene_symbol:EDDM3B
Gene_synonyms:HE3-BETA
Gene_source:HGNC:19223



Transcript annotation


Transcript_name:BC128030
Distance:11
Num_trans:6
All_trans:BC128030:11 ENST00000326783.3:-20 NM_022360:-20 uc001vyd.3:-20 AY358865:-20 X76386:40



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NM_022360
Entrez ID:64184
Nearest Unigene:Hs.525202
Nearest Refseq:NM_022360
Nearest Ensembl:ENSG00000181552
Gene Name:epididymal protein 3B
Gene Alias:EP3B
Gene Description:epididymal protein 3B
Gene Type:protein-coding
CpG%:0
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):