Difference between revisions of "TSS:Mm 83316.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180670.1:29 AK143007:29 |chr=chr9 |cpg_percent=0.095 |distance=29 |distance_to_tss=-135 |end=44134533 |entrez_id=84004 |gc_percent=0.741294...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AV025631= | ||
| + | |CD146= | ||
| + | |CD149= | ||
| + | |Muc18= | ||
|all_trans=ENSMUST00000180670.1:29 AK143007:29 | |all_trans=ENSMUST00000180670.1:29 AK143007:29 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-135 | |distance_to_tss=-135 | ||
|end=44134533 | |end=44134533 | ||
| + | |end_of_center_position=44134524 | ||
|entrez_id=84004 | |entrez_id=84004 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=1 | + | |gene_alias=1-gicerin |
|gene_description=melanoma cell adhesion molecule | |gene_description=melanoma cell adhesion molecule | ||
|gene_id=100038560 | |gene_id=100038560 | ||
| Line 22: | Line 27: | ||
|nearest_unigene=Mm.275003 | |nearest_unigene=Mm.275003 | ||
|num_trans=2 | |num_trans=2 | ||
| + | |s-endo= | ||
| + | |s-gicerin= | ||
|species=mouse | |species=mouse | ||
|start=44134513 | |start=44134513 | ||
| + | |start_of_center_position=44134523 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000180670.1 AK143007 | |transcript_name=ENSMUST00000180670.1 AK143007 | ||
Revision as of 23:21, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44134523 |
|---|---|
| End of the center position in the TSS region: | 44134524 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000180670.1 AK143007 |
|---|---|
| Distance: | 29 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000180670.1:29 AK143007:29 |
TATA-Box annotation
| Distance to TSS: | -135 |
|---|---|
| Nearest PromoterID: | NM_023061 |
| Entrez ID: | 84004 |
| Nearest Unigene: | Mm.275003 |
| Nearest Refseq: | NM_023061 |
| Nearest Ensembl: | ENSMUSG00000032135 |
| Gene Name: | predicted gene 10687 |
| Gene Alias: | 1-gicerin |
| Gene Description: | melanoma cell adhesion molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
