Difference between revisions of "TSS:Mm 135192.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001082546:54 uc007zcm.1:54 ENSMUST00000146691.1:73 ENSMUST00000138796.1:76 ENSMUST00000096089.2:-111 BC100530:-111 |chr=chr16 |cpg_percent=0.015 |dis...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-60 | |distance_to_tss=-60 | ||
|end=36367637 | |end=36367637 | ||
| + | |end_of_center_position=36367631 | ||
|entrez_id=100034684 | |entrez_id=100034684 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=36367623 | |start=36367623 | ||
| + | |start_of_center_position=36367630 | ||
|strand=- | |strand=- | ||
|tata_box="49(CCTTTAAAACCC,+,0.00)" | |tata_box="49(CCTTTAAAACCC,+,0.00)" | ||
Revision as of 01:12, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 36367630 |
|---|---|
| End of the center position in the TSS region: | 36367631 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001082546 uc007zcm.1 |
|---|---|
| Distance: | 54 |
| Num_trans: | 6 |
| All_trans: | NM_001082546:54 uc007zcm.1:54 ENSMUST00000146691.1:73 ENSMUST00000138796.1:76 ENSMUST00000096089.2:-111 BC100530:-111 |
TATA-Box annotation
| Distance to TSS: | -60 |
|---|---|
| Nearest PromoterID: | NM_001082546 |
| Entrez ID: | 100034684 |
| Nearest Unigene: | Mm.383561 |
| Nearest Refseq: | NM_001082546 |
| Nearest Ensembl: | ENSMUSG00000071561 |
| Gene Name: | cDNA sequence BC100530 |
| Gene Alias: | - |
| Gene Description: | cDNA sequence BC100530 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "49(CCTTTAAAACCC,+,0.00)" |
