Difference between revisions of "TSS:Hg 235229.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000363299.1:0 NR_002755:0 uc031tzh.2:0 |chr=chr1 |cpg_percent=0.035 |distance=0 |distance_to_tss=-3 |end=44731175 |entrez_id=26830 |gc_percent=0.4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |U5DL= | ||
| + | |U5DS= | ||
|all_trans=ENST00000363299.1:0 NR_002755:0 uc031tzh.2:0 | |all_trans=ENST00000363299.1:0 NR_002755:0 uc031tzh.2:0 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=44731175 | |end=44731175 | ||
| + | |end_of_center_position=55580256 | ||
|entrez_id=26830 | |entrez_id=26830 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=RNU5D | + | |gene_alias=RNU5D |
|gene_description="RNA, U5D small nuclear 1" | |gene_description="RNA, U5D small nuclear 1" | ||
|gene_id=26830 | |gene_id=26830 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=44731166 | |start=44731166 | ||
| + | |start_of_center_position=55580255 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000363299.1 NR_002755 uc031tzh.2 | |transcript_name=ENST00000363299.1 NR_002755 uc031tzh.2 | ||
Revision as of 01:28, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 55580255 |
|---|---|
| End of the center position in the TSS region: | 55580256 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000363299.1 NR_002755 uc031tzh.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000363299.1:0 NR_002755:0 uc031tzh.2:0 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NR_002755 |
| Entrez ID: | 26830 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_002755 |
| Nearest Ensembl: | ENSG00000200169 |
| Gene Name: | "RNA, U5D small nuclear 1" |
| Gene Alias: | RNU5D |
| Gene Description: | "RNA, U5D small nuclear 1" |
| Gene Type: | snRNA |
| CpG%: | 0.035 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
