Difference between revisions of "TSS:Hg 146613.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000499624.3:0 uc001zyi.4:0 BX537481:0 ENST00000561289.1:45 uc059jdc.1:45 ENST00000499326.1:53 uc059jdd.1:53 ENST00000560359.1:-128 uc059jdb.1:-128...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |E4TF1= | ||
| + | |E4TF1-47= | ||
| + | |E4TF1-53= | ||
| + | |E4TF1B= | ||
| + | |GABPB= | ||
| + | |GABPB-1= | ||
| + | |GABPB2= | ||
| + | |NRF2B1= | ||
| + | |NRF2B2= | ||
|all_trans=ENST00000499624.3:0 uc001zyi.4:0 BX537481:0 ENST00000561289.1:45 uc059jdc.1:45 ENST00000499326.1:53 uc059jdd.1:53 ENST00000560359.1:-128 uc059jdb.1:-128 BC004103:-437 ENST00000619314.1:-497 uc001zyh.5:-497 BC014238:-497 | |all_trans=ENST00000499624.3:0 uc001zyi.4:0 BX537481:0 ENST00000561289.1:45 uc059jdc.1:45 ENST00000499326.1:53 uc059jdd.1:53 ENST00000560359.1:-128 uc059jdb.1:-128 BC004103:-437 ENST00000619314.1:-497 uc001zyh.5:-497 BC014238:-497 | ||
|chr=chr15 | |chr=chr15 | ||
| Line 6: | Line 15: | ||
|distance_to_tss=-49 | |distance_to_tss=-49 | ||
|end=50355500 | |end=50355500 | ||
| + | |end_of_center_position=50355478 | ||
|entrez_id=2553 | |entrez_id=2553 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=BABPB2 | + | |gene_alias=BABPB2 |
|gene_description=GA binding protein transcription factor beta subunit 1 | |gene_description=GA binding protein transcription factor beta subunit 1 | ||
|gene_id=100129387 | |gene_id=100129387 | ||
| Line 24: | Line 34: | ||
|species=human | |species=human | ||
|start=50355455 | |start=50355455 | ||
| + | |start_of_center_position=50355477 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000499624.3 uc001zyi.4 BX537481 | |transcript_name=ENST00000499624.3 uc001zyi.4 BX537481 | ||
Revision as of 10:00, 14 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 50355477 |
|---|---|
| End of the center position in the TSS region: | 50355478 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000499624.3 uc001zyi.4 BX537481 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000499624.3:0 uc001zyi.4:0 BX537481:0 ENST00000561289.1:45 uc059jdc.1:45 ENST00000499326.1:53 uc059jdd.1:53 ENST00000560359.1:-128 uc059jdb.1:-128 BC004103:-437 ENST00000619314.1:-497 uc001zyh.5:-497 BC014238:-497 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NM_001320910 |
| Entrez ID: | 2553 |
| Nearest Unigene: | Hs.654350 |
| Nearest Refseq: | NM_002041 |
| Nearest Ensembl: | ENSG00000104064 |
| Gene Name: | GABPB1 antisense RNA 1 |
| Gene Alias: | BABPB2 |
| Gene Description: | GA binding protein transcription factor beta subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
