Personal tools

TSS:Hg 2031.1

From referenceTSS

Revision as of 21:57, 10 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_2031.1
Species:human
Chr:chr1
TSS Classification:yes
Start:32886435
End:32886453
Strand:+
TSS Score:1
Start of the center position in the TSS region:32886444
End of the center position in the TSS region:32886445



Gene and protein annotation


Transcript_name:ENST00000373467.3 uc001bwh.4
Distance:-1
GeneID:3208
HGNC/MGI_ID:HGNC:5144
UniProt_ID:P84074
Gene_name:hippocalcin
Gene_symbol:HPCA
Gene_synonyms:
Gene_source:HGNC:5144



Transcript annotation


Transcript_name:ENST00000373467.3 uc001bwh.4
Distance:-1
Num_trans:12
All_trans:ENST00000373467.3:-1 uc001bwh.4:-1 ENST00000459874.5:9 uc057enl.1:9 DQ426877:29 AK313907:40 NM_002143:44 BC001777:44 ENST00000480118.5:-354 uc057enk.1:-354 ENST00000470166.5:-442 uc057enj.1:-442



TATA-Box annotation


Distance to TSS:-53
Nearest PromoterID:NM_002143
Entrez ID:3208
Nearest Unigene:Hs.632391
Nearest Refseq:NM_002143
Nearest Ensembl:ENSG00000121905
Gene Name:hippocalcin
Gene Alias:BDR2
Gene Description:hippocalcin
Gene Type:protein-coding
CpG%:0.13
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):