Personal tools

TSS:Hg 101441.1

From referenceTSS

Revision as of 18:43, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_101441.1
Species:human
Chr:chr9
TSS Classification:yes
Start:92536069
End:92536089
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000444490.6 NM_001197296 NM_001197295 NM_001393 uc004asf.5
Distance:-3
GeneID:1842
HGNC/MGI_ID:HGNC:3154
UniProt_ID:O94769
Gene_name:extracellular matrix protein 2
Gene_symbol:ECM2
Gene_synonyms:
Gene_source:HGNC:3154



Transcript annotation


Transcript_name:ENST00000444490.6 NM_001197296 NM_001197295 NM_001393 uc004asf.5
Distance:-3
Num_trans:14
All_trans:ENST00000444490.6:-3 NM_001197296:-3 NM_001197295:-3 NM_001393:-3 uc004asf.5:-3 ENST00000344604.9:15 ENST00000375540.5:15 uc011lty.3:15 uc004asi.4:15 BX537976:15 AK296458:75 AK312820:80 AK303922:82 AB011792:100



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_001197295
Entrez ID:1842
Nearest Unigene:Hs.117060
Nearest Refseq:NM_001393
Nearest Ensembl:ENSG00000106823
Gene Name:extracellular matrix protein 2
Gene Alias:-
Gene Description:extracellular matrix protein 2
Gene Type:protein-coding
CpG%:0
GC%:0.348259
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"60(GTTTTTAAAGAA,+,0.00)"