Basic information about the TSS
| TSS ID: | hg_105362.1 |
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| Species: | human |
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| Chr: | chr10 |
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| TSS Classification: | yes |
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| Start: | 69801893 |
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| End: | 69801947 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 69801920 |
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| End of the center position in the TSS region: | 69801921 |
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Gene and protein annotation
| Transcript_name: | ENST00000479733.5 ENST00000398978.7 ENST00000354547.7 ENST00000357811.7 uc057tui.1 uc057tuj.1 uc057tuk.1 uc057tul.1 BC139913 AJ293624 |
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| Distance: | 0 |
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| GeneID: | 1305 |
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| HGNC/MGI_ID: | HGNC:2190 |
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| UniProt_ID: | E7EX21 Q5TAT6 |
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| Gene_name: | collagen type XIII alpha 1 |
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| Gene_symbol: | COL13A1 |
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| Gene_synonyms: | |
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| Gene_source: | HGNC:2190 |
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Transcript annotation
| Transcript_name: | ENST00000479733.5 ENST00000398978.7 ENST00000354547.7 ENST00000357811.7 uc057tui.1 uc057tuj.1 uc057tuk.1 uc057tul.1 BC139913 AJ293624 |
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| Distance: | 0 |
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| Num_trans: | 27 |
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| All_trans: | ENST00000479733.5:0 ENST00000398978.7:0 ENST00000354547.7:0 ENST00000357811.7:0 uc057tui.1:0 uc057tuj.1:0 uc057tuk.1:0 uc057tul.1:0 BC139913:0 AJ293624:0 NM_080805:-6 NM_080800:-6 NM_080802:-6 NM_080801:-6 NM_001130103:-6 NM_080798:-6 ENST00000520267.5:171 ENST00000398969.7:171 uc057tum.1:171 uc057tun.1:171 BC136385:171 ENST00000517713.5:477 ENST00000522165.5:477 ENST00000520133.5:477 uc057tuo.1:477 uc057tup.1:477 uc057tuq.1:477 |
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TATA-Box annotation
| Distance to TSS: | 32 |
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| Nearest PromoterID: | NM_080805 |
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| Entrez ID: | 1305 |
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| Nearest Unigene: | Hs.695934 |
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| Nearest Refseq: | NM_005203 |
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| Nearest Ensembl: | ENSG00000197467 |
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| Gene Name: | collagen type XIII alpha 1 |
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| Gene Alias: | CMS19 |
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| Gene Description: | collagen type XIII alpha 1 chain |
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| Gene Type: | protein-coding |
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| CpG%: | 0.08 |
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| GC%: | 0.666667 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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