Basic information about the TSS
| TSS ID: | hg_105811.1 |
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| Species: | human |
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| Chr: | chr10 |
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| TSS Classification: | yes |
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| Start: | 79610863 |
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| End: | 79610872 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 79610867 |
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| End of the center position in the TSS region: | 79610868 |
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Gene and protein annotation
| Transcript_name: | ENST00000398636.7 ENST00000428376.6 NM_005411 NM_001164646 NM_001093770 NM_001164645 NM_001164644 NM_001164647 uc001kap.4 uc001kar.4 AK290703 AK298002 AK298034 AK298029 |
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| Distance: | 67 |
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| GeneID: | 653509 |
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| HGNC/MGI_ID: | HGNC:10798 |
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| UniProt_ID: | A0A024QZP2 B4DNP6 B4DNR9 B4DNS3 Q8IWL2 |
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| Gene_name: | surfactant protein A1 |
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| Gene_symbol: | SFTPA1 |
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| Gene_synonyms: | COLEC4 SP-A SP-A1 |
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| Gene_source: | HGNC:10798 |
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Transcript annotation
| Transcript_name: | ENST00000398636.7 ENST00000428376.6 NM_005411 NM_001164646 NM_001093770 NM_001164645 NM_001164644 NM_001164647 uc001kap.4 uc001kar.4 AK290703 AK298002 AK298034 AK298029 |
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| Distance: | 67 |
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| Num_trans: | 44 |
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| All_trans: | ENST00000398636.7:67 ENST00000428376.6:67 NM_005411:67 NM_001164646:67 NM_001093770:67 NM_001164645:67 NM_001164644:67 NM_001164647:67 uc001kap.4:67 uc001kar.4:67 AK290703:67 AK298002:67 AK298034:67 AK298029:67 AK316196:68 HQ021433:68 HQ021434:68 HQ021435:68 HQ021436:68 HQ021437:68 HQ021438:68 HQ021439:68 HQ021440:68 HQ021441:68 HQ021442:68 JX502764:68 JX502765:68 AK298092:70 S69687:72 S69688:72 S69690:72 AK309518:72 ENST00000419470.6:73 uc009xry.4:73 BC026229:73 M13686:79 ENST00000429958.5:81 uc057ulj.1:81 ENST00000439264.1:83 uc057ulk.1:83 BC111570:88 ENST00000486922.1:89 uc057ull.1:89 BC029913:447 |
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TATA-Box annotation
| Distance to TSS: | -71 |
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| Nearest PromoterID: | NM_001164647 |
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| Entrez ID: | 653509 |
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| Nearest Unigene: | Hs.535295 |
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| Nearest Refseq: | NM_005411 |
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| Nearest Ensembl: | ENSG00000122852 |
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| Gene Name: | surfactant protein A1 |
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| Gene Alias: | COLEC4 |
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| Gene Description: | surfactant protein A1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.005 |
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| GC%: | 0.552239 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "40(ATCTATAAATGC,-,0.00)" |
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