Personal tools

TSS:Hg 102996.1

From referenceTSS

Revision as of 19:50, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_102996.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133376023
End:133376034
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:BC111023
Distance:0
GeneID:6836
HGNC/MGI_ID:HGNC:11476
UniProt_ID:
Gene_name:surfeit 4
Gene_symbol:SURF4
Gene_synonyms:ERV29 FLJ22993 MGC102753
Gene_source:HGNC:11476



Transcript annotation


Transcript_name:BC111023
Distance:0
Num_trans:43
All_trans:BC111023:0 BX647961:5 ENST00000371991.3:-9 uc064wvc.1:-9 ENST00000371982.3:14 uc064wvd.1:14 AF078866:-24 AF078867:-24 AK293434:24 AK300004:-25 AK299656:-26 AK303309:-26 AK316480:-26 AK295435:-29 ENST00000467910.5:33 uc064wvb.1:33 BC018741:35 AB528538:50 DQ892024:53 DQ895216:53 AM392907:53 KJ892231:54 CU676306:54 ENST00000371989.7:-65 ENST00000485435.6:-65 uc004cdj.5:-65 uc064wuz.1:-65 Y14820:76 AK315488:-84 ENST00000545297.5:-132 ENST00000613129.4:-132 ENST00000618229.4:-132 NM_033161:-132 NM_001280792:-132 NM_001280791:-132 NM_001280790:-132 NM_001280789:-132 NM_001280793:-132 uc011mdd.4:-132 uc011mdb.4:-132 uc011mdc.4:-132 AK301737:459 AK310333:462



TATA-Box annotation


Distance to TSS:137
Nearest PromoterID:NM_001280793
Entrez ID:6836
Nearest Unigene:Hs.512465
Nearest Refseq:NM_033161
Nearest Ensembl:ENSG00000148248
Gene Name:surfeit 4
Gene Alias:ERV29
Gene Description:surfeit 4
Gene Type:protein-coding
CpG%:0.15
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):