Personal tools

TSS:Mm 99345.1

From referenceTSS

Revision as of 03:49, 22 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_99345.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101552849
End:101552874
Strand:+
TSS Score:1
Start of the center position in the TSS region:101552861
End of the center position in the TSS region:101552862



Gene and protein annotation


Transcript_name:ENSMUST00000107213.7 ENSMUST00000123558.7 ENSMUST00000107208.7 ENSMUST00000149170.1 LF204986 MA440563 U73039 AK128992 BC052709 AK154081 LF198900 MA434477
Distance:0
GeneID:17966
HGNC/MGI_ID:MGI:108498
UniProt_ID:A2A4N5 A2A4N8 Q05BC8
Gene_name:NBR1, autophagy cargo receptor
Gene_symbol:Nbr1
Gene_synonyms:
Gene_source:MGI:108498



Transcript annotation


Transcript_name:ENSMUST00000107213.7 ENSMUST00000123558.7 ENSMUST00000107208.7 ENSMUST00000149170.1 LF204986 MA440563 U73039 AK128992 BC052709 AK154081 LF198900 MA434477
Distance:0
Num_trans:22
All_trans:ENSMUST00000107213.7:0 ENSMUST00000123558.7:0 ENSMUST00000107208.7:0 ENSMUST00000149170.1:0 LF204986:0 MA440563:0 U73039:0 AK128992:0 BC052709:0 AK154081:0 LF198900:0 MA434477:0 ENSMUST00000107212.7:8 AK129043:10 ENSMUST00000127421.7:27 ENSMUST00000103098.8:-196 NM_001252223:-196 NR_152788:-196 NM_001252222:-196 NM_008676:-196 LF230749:-316 MA466326:-316



TATA-Box annotation


Distance to TSS:208
Nearest PromoterID:NM_008676
Entrez ID:17966
Nearest Unigene:Mm.784
Nearest Refseq:NM_008676
Nearest Ensembl:ENSMUSG00000017119
Gene Name:NBR1, autophagy cargo receptor
Gene Alias:mKIAA0049
Gene Description:NBR1, autophagy cargo receptor
Gene Type:protein-coding
CpG%:0.06
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):