Personal tools

TSS:Mm 99823.1

From referenceTSS

Revision as of 04:00, 22 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_99823.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:108920342
End:108920358
Strand:+
TSS Score:1
Start of the center position in the TSS region:108920350
End of the center position in the TSS region:108920351



Gene and protein annotation


Transcript_name:ENSMUST00000052915.13 NM_015732 AK142333
Distance:0
GeneID:12006
HGNC/MGI_ID:MGI:1270862
UniProt_ID:O88566 Q3UQK5
Gene_name:axin 2
Gene_symbol:Axin2
Gene_synonyms:Axil Conductin
Gene_source:MGI:1270862



Transcript annotation


Transcript_name:ENSMUST00000052915.13 NM_015732 AK142333
Distance:0
Num_trans:7
All_trans:ENSMUST00000052915.13:0 NM_015732:0 AK142333:0 BC057338:8 AK049192:49 AF073788:126 ENSMUST00000140821.1:442



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_015732
Entrez ID:12006
Nearest Unigene:Mm.71710
Nearest Refseq:NM_015732
Nearest Ensembl:ENSMUSG00000000142
Gene Name:axin 2
Gene Alias:Axi1|Axil|Conductin
Gene Description:axin 2
Gene Type:protein-coding
CpG%:0.135
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-34(GTCCCTTTAAGG,-,0.00),-32(CCCTTTAAGGCG,+,0.00),-31(CCTTTAAGGCGG,+,0.00)