Personal tools

TSS:Hg 102024.1

From referenceTSS

Revision as of 11:23, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_102024.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111599859
End:111599870
Strand:-
TSS Score:1
Start of the center position in the TSS region:111599864
End of the center position in the TSS region:111599865



Gene and protein annotation


Transcript_name:ENST00000538962.5 ENST00000407693.6 NM_001146109 NM_001146108 uc011lwr.2 uc004bfi.3 AK289597
Distance:5
GeneID:22949
HGNC/MGI_ID:HGNC:18429
UniProt_ID:Q14914
Gene_name:prostaglandin reductase 1
Gene_symbol:PTGR1
Gene_synonyms:ZADH3
Gene_source:HGNC:18429



Transcript annotation


Transcript_name:ENST00000538962.5 ENST00000407693.6 NM_001146109 NM_001146108 uc011lwr.2 uc004bfi.3 AK289597
Distance:5
Num_trans:22
All_trans:ENST00000538962.5:5 ENST00000407693.6:5 NM_001146109:5 NM_001146108:5 uc011lwr.2:5 uc004bfi.3:5 AK289597:5 AK298379:25 AK309866:39 ENST00000374313.5:44 uc064vbd.1:44 ENST00000422125.1:165 uc064vbc.1:165 AK309450:213 AK091948:215 D49387:235 NM_012212:429 BC035228:429 ENST00000309195.9:453 ENST00000374308.1:453 uc004bfh.3:453 uc064vbe.1:453



TATA-Box annotation


Distance to TSS:-10
Nearest PromoterID:NM_001146109
Entrez ID:22949
Nearest Unigene:Hs.584864
Nearest Refseq:NM_012212
Nearest Ensembl:ENSG00000106853
Gene Name:prostaglandin reductase 1
Gene Alias:LTB4DH
Gene Description:prostaglandin reductase 1
Gene Type:protein-coding
CpG%:0.085
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):