Personal tools

TSS:Hg 106025.1

From referenceTSS

Revision as of 06:19, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_106025.1
Species:human
Chr:chr10
TSS Classification:yes
Start:87659838
End:87659886
Strand:+
TSS Score:1
Start of the center position in the TSS region:87659862
End of the center position in the TSS region:87659863



Gene and protein annotation


Transcript_name:BC009894 AK312556
Distance:0
GeneID:9060
HGNC/MGI_ID:HGNC:8604
UniProt_ID:
Gene_name:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene_symbol:PAPSS2
Gene_synonyms:ATPSK2
Gene_source:HGNC:8604



Transcript annotation


Transcript_name:BC009894 AK312556
Distance:0
Num_trans:20
All_trans:BC009894:0 AK312556:0 AF091242:15 AF150754:15 AF074331:33 AF173365:48 DQ893625:91 DQ895430:91 KR710243:94 KR710244:94 KJ905366:94 AF313907:96 ENST00000456849.1:-120 NM_004670:-120 NM_001015880:-120 uc001kew.4:-120 ENST00000361175.8:-226 uc001kex.4:-226 ENST00000465996.5:471 uc057usd.1:471



TATA-Box annotation


Distance to TSS:143
Nearest PromoterID:NM_001015880
Entrez ID:9060
Nearest Unigene:Hs.524491
Nearest Refseq:NM_004670
Nearest Ensembl:ENSG00000198682
Gene Name:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene Alias:ATPSK2
Gene Description:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene Type:protein-coding
CpG%:0.105
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-14(CTTTTTATACCT,+,0.00)"