Personal tools

TSS:Hg 103908.1

From referenceTSS

Revision as of 20:29, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_103908.1
Species:human
Chr:chr10
TSS Classification:yes
Start:12129642
End:12129721
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000441368.5 ENST00000475268.5 ENST00000298428.13 ENST00000495368.1 ENST00000304267.12 ENST00000472221.5 uc057rrz.1 uc057rsa.1 uc001ile.3 uc001ilf.5 uc001ilg.5 uc057rsb.1 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640
Distance:0
GeneID:55176
HGNC/MGI_ID:HGNC:17702
UniProt_ID:B3KQ68 C9JJV4 F2Z2C7 Q8TC24 Q9H9S3
Gene_name:Sec61 translocon alpha 2 subunit
Gene_symbol:SEC61A2
Gene_synonyms:FLJ10578
Gene_source:HGNC:17702



Transcript annotation


Transcript_name:ENST00000441368.5 ENST00000475268.5 ENST00000298428.13 ENST00000495368.1 ENST00000304267.12 ENST00000472221.5 uc057rrz.1 uc057rsa.1 uc001ile.3 uc001ilf.5 uc001ilg.5 uc057rsb.1 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640
Distance:0
Num_trans:31
All_trans:ENST00000441368.5:0 ENST00000475268.5:0 ENST00000298428.13:0 ENST00000495368.1:0 ENST00000304267.12:0 ENST00000472221.5:0 uc057rrz.1:0 uc057rsa.1:0 uc001ile.3:0 uc001ilf.5:0 uc001ilg.5:0 uc057rsb.1:0 AK301841:0 AK292295:0 BC026179:0 AF346603:0 AK057532:0 AK022640:0 ENST00000379033.7:-2 NR_024577:-2 NM_001142628:-2 NM_001142627:-2 NR_024576:-2 NM_018144:-2 uc010qbq.1:-2 ENST00000379051.5:-6 ENST00000379020.8:6 uc057rry.1:-6 uc057rsc.1:6 ENST00000379017.7:12 uc057rsd.1:12



TATA-Box annotation


Distance to TSS:41
Nearest PromoterID:NR_024576
Entrez ID:55176
Nearest Unigene:Hs.112955
Nearest Refseq:NM_018144
Nearest Ensembl:ENSG00000065665
Gene Name:Sec61 translocon alpha 2 subunit
Gene Alias:-
Gene Description:Sec61 translocon alpha 2 subunit
Gene Type:protein-coding
CpG%:0.15
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):