Basic information about the TSS
| TSS ID: | hg_105812.1 |
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| Species: | human |
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| Chr: | chr10 |
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| TSS Classification: | yes |
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| Start: | 79610882 |
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| End: | 79610895 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | |
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| End of the center position in the TSS region: | |
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Gene and protein annotation
| Transcript_name: | ENST00000398636.7 ENST00000428376.6 NM_005411 NM_001164646 NM_001093770 NM_001164645 NM_001164644 NM_001164647 uc001kap.4 uc001kar.4 AK290703 AK298002 AK298034 AK298029 |
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| Distance: | 44 |
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| GeneID: | 653509 |
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| HGNC/MGI_ID: | HGNC:10798 |
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| UniProt_ID: | A0A024QZP2 B4DNP6 B4DNR9 B4DNS3 Q8IWL2 |
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| Gene_name: | surfactant protein A1 |
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| Gene_symbol: | SFTPA1 |
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| Gene_synonyms: | COLEC4 SP-A SP-A1 |
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| Gene_source: | HGNC:10798 |
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Transcript annotation
| Transcript_name: | ENST00000398636.7 ENST00000428376.6 NM_005411 NM_001164646 NM_001093770 NM_001164645 NM_001164644 NM_001164647 uc001kap.4 uc001kar.4 AK290703 AK298002 AK298034 AK298029 |
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| Distance: | 44 |
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| Num_trans: | 44 |
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| All_trans: | ENST00000398636.7:44 ENST00000428376.6:44 NM_005411:44 NM_001164646:44 NM_001093770:44 NM_001164645:44 NM_001164644:44 NM_001164647:44 uc001kap.4:44 uc001kar.4:44 AK290703:44 AK298002:44 AK298034:44 AK298029:44 AK316196:45 HQ021433:45 HQ021434:45 HQ021435:45 HQ021436:45 HQ021437:45 HQ021438:45 HQ021439:45 HQ021440:45 HQ021441:45 HQ021442:45 JX502764:45 JX502765:45 AK298092:47 S69687:49 S69688:49 S69690:49 AK309518:49 ENST00000419470.6:50 uc009xry.4:50 BC026229:50 M13686:56 ENST00000429958.5:58 uc057ulj.1:58 ENST00000439264.1:60 uc057ulk.1:60 BC111570:65 ENST00000486922.1:66 uc057ull.1:66 BC029913:424 |
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TATA-Box annotation
| Distance to TSS: | -50 |
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| Nearest PromoterID: | NM_001164647 |
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| Entrez ID: | 653509 |
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| Nearest Unigene: | Hs.535295 |
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| Nearest Refseq: | NM_005411 |
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| Nearest Ensembl: | ENSG00000122852 |
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| Gene Name: | surfactant protein A1 |
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| Gene Alias: | COLEC4 |
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| Gene Description: | surfactant protein A1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.005 |
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| GC%: | 0.557214 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "19(ATCTATAAATGC,-,0.00)" |
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