Personal tools

TSS:Mm 10114.1

From referenceTSS

Revision as of 00:35, 15 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_10114.1
Species:mouse
Chr:chr2
TSS Classification:yes
Start:3713517
End:3713528
Strand:+
TSS Score:1
Start of the center position in the TSS region:3713522
End of the center position in the TSS region:3713523



Gene and protein annotation


Transcript_name:BC021353
Distance:-15
GeneID:66540
HGNC/MGI_ID:MGI:1913790
UniProt_ID:
Gene_name:"family with sequence similarity 107, member B"
Gene_symbol:Fam107b
Gene_synonyms:3110001A13Rik
Gene_source:MGI:1913790



Transcript annotation


Transcript_name:BC021353
Distance:-15
Num_trans:10
All_trans:BC021353:-15 AK019815:18 AK013932:-25 AK168759:-25 ENSMUST00000115053.8:-40 ENSMUST00000177125.1:-40 ENSMUST00000027965.10:-60 NM_025626:-60 uc008iek.1:-60 AK032875:-60



TATA-Box annotation


Distance to TSS:65
Nearest PromoterID:NM_025626
Entrez ID:66540
Nearest Unigene:Mm.277864
Nearest Refseq:NM_025626
Nearest Ensembl:ENSMUSG00000026655
Gene Name:"family with sequence similarity 107, member B"
Gene Alias:3110001A13Rik
Gene Description:"family with sequence similarity 107, member B"
Gene Type:protein-coding
CpG%:0.15
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):