Personal tools

TSS:Hg 170932.1

From referenceTSS

Revision as of 12:19, 15 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_170932.1
Species:human
Chr:chr18
TSS Classification:yes
Start:80148040
End:80148055
Strand:+
TSS Score:1
Start of the center position in the TSS region:80148047
End of the center position in the TSS region:80148048



Gene and protein annotation


Transcript_name:ENST00000588226.5 ENST00000585422.1 uc060qmi.1 uc060qmj.1 AK056304
Distance:0
GeneID:100130522
HGNC/MGI_ID:HGNC:44109
UniProt_ID:
Gene_name:PARD6G antisense RNA 1
Gene_symbol:PARD6G-AS1
Gene_synonyms:
Gene_source:HGNC:44109



Transcript annotation


Transcript_name:ENST00000588226.5 ENST00000585422.1 uc060qmi.1 uc060qmj.1 AK056304
Distance:0
Num_trans:13
All_trans:ENST00000588226.5:0 ENST00000585422.1:0 uc060qmi.1:0 uc060qmj.1:0 AK056304:0 ENST00000589574.1:-30 uc010xfo.3:-30 ENST00000586421.1:-116 uc002lnx.3:-116 ENST00000587254.5:-117 NR_028340:-117 NR_028339:-117 uc060qmh.1:-117



TATA-Box annotation


Distance to TSS:124
Nearest PromoterID:NR_028340
Entrez ID:100130522
Nearest Unigene:Hs.352602
Nearest Refseq:NM_001145731
Nearest Ensembl:ENSG00000267270
Gene Name:PARD6G antisense RNA 1
Gene Alias:-
Gene Description:PARD6G antisense RNA 1
Gene Type:ncRNA
CpG%:0.04
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-34(GGCTATAAATGT,-,0.00)"