Basic information about the TSS
| TSS ID: | hg_103936.1 |
|---|
| Species: | human |
|---|
| Chr: | chr10 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 13099901 |
|---|
| End: | 13099926 |
|---|
| Strand: | + |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 13099913 |
|---|
| End of the center position in the TSS region: | 13099914 |
|---|
Gene and protein annotation
| Transcript_name: | NM_001008213 NM_021980 NM_001008211 |
|---|
| Distance: | 156 |
|---|
| GeneID: | 10133 |
|---|
| HGNC/MGI_ID: | HGNC:17142 |
|---|
| UniProt_ID: | Q96CV9 |
|---|
| |
| Gene_name: | optineurin |
|---|
| Gene_symbol: | OPTN |
|---|
| Gene_synonyms: | FIP-2 FIP2 HIP7 HYPL NRP TFIIIA-INTP |
|---|
| Gene_source: | HGNC:17142 |
|---|
|
Transcript annotation
| Transcript_name: | NM_001008213 NM_021980 NM_001008211 |
|---|
| Distance: | 156 |
|---|
| Num_trans: | 22 |
|---|
| All_trans: | NM_001008213:156 NM_021980:156 NM_001008211:156 AK316171:210 AK303715:232 ENST00000487935.1:233 ENST00000482140.5:237 ENST00000378747.8:237 NM_001008212:237 ENST00000378757.6:243 BC013876:243 ENST00000430081.5:247 ENST00000378752.7:247 ENST00000378748.7:247 BC032762:247 AF061034:284 ENST00000378764.6:-299 AF420371:299 AF420372:299 AF420373:299 ENST00000263036.9:-453 AK055403:-453 |
|---|
TATA-Box annotation
| Distance to TSS: | 75 |
|---|
| Nearest PromoterID: | NM_001282658 |
|---|
| Entrez ID: | 83643 |
|---|
| Nearest Unigene: | Hs.498720 |
|---|
| Nearest Refseq: | NM_031455 |
|---|
| Nearest Ensembl: | ENSG00000151468 |
|---|
| Gene Name: | optineurin |
|---|
| Gene Alias: | - |
|---|
| Gene Description: | coiled-coil domain containing 3 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.08 |
|---|
| GC%: | 0.61194 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
