Basic information about the TSS
| TSS ID: | hg_105972.1 |
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| Species: | human |
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| Chr: | chr10 |
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| TSS Classification: | yes |
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| Start: | 86668408 |
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| End: | 86668414 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 86668411 |
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| End of the center position in the TSS region: | 86668412 |
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Gene and protein annotation
| Transcript_name: | ENST00000623056.4 AK304760 |
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| Distance: | 93 |
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| GeneID: | 11155 |
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| HGNC/MGI_ID: | HGNC:15710 |
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| UniProt_ID: | O75112 |
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| Gene_name: | LIM domain binding 3 |
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| Gene_symbol: | LDB3 |
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| Gene_synonyms: | KIAA0613 PDLIM6 ZASP |
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| Gene_source: | HGNC:15710 |
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Transcript annotation
| Transcript_name: | ENST00000623056.4 AK304760 |
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| Distance: | 93 |
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| Num_trans: | 39 |
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| All_trans: | ENST00000623056.4:93 AK304760:93 AK300692:96 ENST00000263066.11:97 ENST00000429277.7:97 ENST00000361373.9:97 NM_001080115:97 NM_001080114:97 NM_001171611:97 NM_001368067:97 NM_007078:97 NM_001368065:97 NM_001368066:97 NM_001171610:97 AK297871:97 NM_001080116:150 ENST00000372066.8:199 AJ133766:199 BC010929:253 AB014513:257 BC111457:273 KJ898368:276 KR710344:276 KR710345:276 KR710346:276 KR710347:276 AB383921:277 ENST00000372056.8:278 ENST00000542786.2:278 ENST00000623007.3:278 KU178543:278 KU178544:278 KU178545:278 AF276807:278 AF276808:278 AF276809:278 KF772970:278 AJ133767:278 AJ133768:278 |
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TATA-Box annotation
| Distance to TSS: | -100 |
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| Nearest PromoterID: | NM_001080114 |
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| Entrez ID: | 11155 |
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| Nearest Unigene: | Hs.657271 |
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| Nearest Refseq: | NM_007078 |
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| Nearest Ensembl: | ENSG00000122367 |
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| Gene Name: | LIM domain binding 3 |
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| Gene Alias: | CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP |
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| Gene Description: | LIM domain binding 3 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.04 |
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| GC%: | 0.631841 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 41(GTCCATTTATGG,-,0.00),43(CCATTTATGGGC,+,0.00) |
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