Personal tools

TSS:Mm 101606.1

From referenceTSS

Revision as of 16:44, 19 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_101606.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:34833631
End:34833663
Strand:-
TSS Score:1
Start of the center position in the TSS region:34833647
End of the center position in the TSS region:34833648



Gene and protein annotation


Transcript_name:ENSMUST00000093191.2 NM_027411 AK012927
Distance:0
GeneID:70385
HGNC/MGI_ID:MGI:1917635
UniProt_ID:Q923A2 Q9CSG1
Gene_name:spindle apparatus coiled-coil protein 1
Gene_symbol:Spdl1
Gene_synonyms:1700018I02Rik 2600001J17Rik 2810049B11Rik Ccdc99
Gene_source:MGI:1917635



Transcript annotation


Transcript_name:ENSMUST00000093191.2 NM_027411 AK012927
Distance:0
Num_trans:14
All_trans:ENSMUST00000093191.2:0 NM_027411:0 AK012927:0 BC006674:8 LF198432:-9 MA434009:-9 AK011138:19 ENSMUST00000148387.1:40 AK163303:40 LF226964:98 MA462541:98 AK139553:117 LF226963:346 MA462540:346



TATA-Box annotation


Distance to TSS:-6
Nearest PromoterID:NM_027411
Entrez ID:70385
Nearest Unigene:Mm.194368
Nearest Refseq:NM_027411
Nearest Ensembl:ENSMUSG00000069910
Gene Name:spindle apparatus coiled-coil protein 1
Gene Alias:1700018I02Rik|2600001J17Rik|2810049B11Rik|AA409762|Ccdc99
Gene Description:spindle apparatus coiled-coil protein 1
Gene Type:protein-coding
CpG%:0.075
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):