Personal tools

TSS:Mm 100679.1

From referenceTSS

Revision as of 14:36, 16 March 2018 by Autoedit (talk | contribs) (Created page with "{{TSSDetail |all_trans=NM_001290473:-57 NR_110959:-57 NM_145355:-57 NM_001290472:-57 uc007hsv.2:-57 uc007hsw.2:-57 uc056yje.1:-57 uc056yjf.1:-57 AK075756:-57 |chr=chr11 |cpg_p...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100679.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:3452887
End:3452899
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:NM_001290473 NR_110959 NM_145355 NM_001290472 uc007hsv.2 uc007hsw.2 uc056yje.1 uc056yjf.1 AK075756
Distance:-57
GeneID:193670
HGNC/MGI_ID:MGI:1922078
UniProt_ID:Q91YT2 Q91YT2-2
Gene_name:ring finger protein 185
Gene_symbol:Rnf185
Gene_synonyms:1700022N24Rik
Gene_source:MGI:1922078



Transcript annotation


Transcript_name:NM_001290473 NR_110959 NM_145355 NM_001290472 uc007hsv.2 uc007hsw.2 uc056yje.1 uc056yjf.1 AK075756
Distance:-57
Num_trans:9
All_trans:NM_001290473:-57 NR_110959:-57 NM_145355:-57 NM_001290472:-57 uc007hsv.2:-57 uc007hsw.2:-57 uc056yje.1:-57 uc056yjf.1:-57 AK075756:-57



TATA-Box annotation


Distance to TSS:63
Nearest PromoterID:NM_001290472
Entrez ID:193670
Nearest Unigene:Mm.136973
Nearest Refseq:NM_145355
Nearest Ensembl:ENSMUSG00000020448
Gene Name:ring finger protein 185
Gene Alias:-
Gene Description:ring finger protein 185
Gene Type:protein-coding
CpG%:0.04
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-35(TACTATAAAAGG,-,0.00)"