Basic information about the TSS
| TSS ID: | mm_101289.1 |
|---|
| Species: | mouse |
|---|
| Chr: | chr11 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 22001605 |
|---|
| End: | 22001631 |
|---|
| Strand: | - |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | |
|---|
| End of the center position in the TSS region: | |
|---|
Gene and protein annotation
| Transcript_name: | ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 |
|---|
| Distance: | 0 |
|---|
| GeneID: | 18423 |
|---|
| HGNC/MGI_ID: | MGI:97450 |
|---|
| UniProt_ID: | Q3TYJ4 Q5SS54 |
|---|
| |
| Gene_name: | orthodenticle homeobox 1 |
|---|
| Gene_symbol: | Otx1 |
|---|
| Gene_synonyms: | A730044F23Rik jv |
|---|
| Gene_source: | MGI:97450 |
|---|
|
Transcript annotation
| Transcript_name: | ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 |
|---|
| Distance: | 0 |
|---|
| Num_trans: | 13 |
|---|
| All_trans: | ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023:-20 uc007idy.1:-20 uc007idz.1:-20 BC057105:45 ENSMUST00000172395.2:-79 AK049430:-79 BC058354:445 |
|---|
TATA-Box annotation
| Distance to TSS: | 33 |
|---|
| Nearest PromoterID: | NM_011023 |
|---|
| Entrez ID: | 18423 |
|---|
| Nearest Unigene: | Mm.129663 |
|---|
| Nearest Refseq: | NM_011023 |
|---|
| Nearest Ensembl: | ENSMUSG00000005917 |
|---|
| Gene Name: | orthodenticle homeobox 1 |
|---|
| Gene Alias: | A730044F23Rik |
|---|
| Gene Description: | orthodenticle homeobox 1 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.05 |
|---|
| GC%: | 0.522388 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
