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TSS:Mm 101458.1

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Revision as of 15:01, 16 March 2018 by Autoedit (talk | contribs) (Created page with "{{TSSDetail |all_trans=ENSMUST00000124231.1:403 AK220456:403 |chr=chr11 |cpg_percent=0.105 |distance=403 |distance_to_tss=-47850 |end=30267628 |entrez_id=20742 |gc_percent=0.7...")
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Basic information about the TSS


TSS ID:mm_101458.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:30267616
End:30267628
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENSMUST00000124231.1 AK220456
Distance:403
GeneID:20742
HGNC/MGI_ID:MGI:98388
UniProt_ID:A0A0A0MQG2 Q5DTR4
Gene_name:"spectrin beta, non-erythrocytic 1"
Gene_symbol:Sptbn1
Gene_synonyms:9930031C03Rik Spnb-2 Spnb2 beta_fodrin brain_spectrin elf1 elf3 non-erythrocytic spectrin_G
Gene_source:MGI:98388



Transcript annotation


Transcript_name:ENSMUST00000124231.1 AK220456
Distance:403
Num_trans:2
All_trans:ENSMUST00000124231.1:403 AK220456:403



TATA-Box annotation


Distance to TSS:-47850
Nearest PromoterID:NM_175836
Entrez ID:20742
Nearest Unigene:Mm.123110
Nearest Refseq:NM_009260
Nearest Ensembl:ENSMUSG00000020315
Gene Name:"spectrin beta, non-erythrocytic 1"
Gene Alias:9930031C03Rik
Gene Description:"spectrin beta, non-erythrocytic 1"
Gene Type:protein-coding
CpG%:0.105
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):