Personal tools

TSS:Hg 100508.1

From referenceTSS

Revision as of 17:10, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_100508.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34381540
End:34381604
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000379127.1 ENST00000379133.7 NM_001252195 NM_147168 NM_147169 uc022bgb.3 uc003zug.3 AK094751
Distance:0
GeneID:84688
HGNC/MGI_ID:HGNC:19919
UniProt_ID:Q8NCR6
Gene_name:chromosome 9 open reading frame 24
Gene_symbol:C9orf24
Gene_synonyms:CBE1 MGC32921 MGC33614 NYD-SP22 SMRP1 bA573M23.4
Gene_source:HGNC:19919



Transcript annotation


Transcript_name:ENST00000379127.1 ENST00000379133.7 NM_001252195 NM_147168 NM_147169 uc022bgb.3 uc003zug.3 AK094751
Distance:0
Num_trans:14
All_trans:ENST00000379127.1:0 ENST00000379133.7:0 NM_001252195:0 NM_147168:0 NM_147169:0 uc022bgb.3:0 uc003zug.3:0 AK094751:0 ENST00000379126.7:3 uc003zuf.3:3 AF367474:3 ENST00000379124.5:10 uc064srw.1:10 AK225981:41



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_147168
Entrez ID:84688
Nearest Unigene:Hs.50334
Nearest Refseq:NM_032596
Nearest Ensembl:ENSG00000164972
Gene Name:chromosome 9 open reading frame 24
Gene Alias:CBE1
Gene Description:chromosome 9 open reading frame 24
Gene Type:protein-coding
CpG%:0.045
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"66(ACCCCTAAAAGG,-,0.00)"