Personal tools

TSS:Hg 100561.1

From referenceTSS

Revision as of 17:11, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_100561.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35072588
End:35072635
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000448530.5 uc064svs.1 BC096751 AK312310
Distance:0
GeneID:7415
HGNC/MGI_ID:HGNC:12666
UniProt_ID:C9IZA5
Gene_name:valosin containing protein
Gene_symbol:VCP
Gene_synonyms:IBMPFD p97
Gene_source:HGNC:12666



Transcript annotation


Transcript_name:ENST00000448530.5 uc064svs.1 BC096751 AK312310
Distance:0
Num_trans:18
All_trans:ENST00000448530.5:0 uc064svs.1:0 BC096751:0 AK312310:0 BC012195:-5 BC017171:-5 BC021055:-5 FJ224344:22 AF100752:22 FJ224352:22 BC023563:34 BC110913:37 ENST00000493886.5:40 uc064svo.1:40 BC122550:40 BC121794:40 NM_007126:-107 AB385152:232



TATA-Box annotation


Distance to TSS:130
Nearest PromoterID:NM_007126
Entrez ID:7415
Nearest Unigene:Hs.529782
Nearest Refseq:NM_007126
Nearest Ensembl:ENSG00000165280
Gene Name:valosin containing protein
Gene Alias:ALS14
Gene Description:valosin containing protein
Gene Type:protein-coding
CpG%:0.115
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):