Basic information about the TSS
| TSS ID: | hg_101576.1 |
|---|
| Species: | human |
|---|
| Chr: | chr9 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 95516837 |
|---|
| End: | 95516846 |
|---|
| Strand: | - |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | |
|---|
| End of the center position in the TSS region: | |
|---|
Gene and protein annotation
| Transcript_name: | ENST00000437951.5 ENST00000375274.6 NM_001083603 NM_001083602 uc010mrr.4 uc004avm.5 AB189436 AB189437 |
|---|
| Distance: | -119 |
|---|
| GeneID: | 5727 |
|---|
| HGNC/MGI_ID: | HGNC:9585 |
|---|
| UniProt_ID: | Q13635 Q59FG5 |
|---|
| |
| Gene_name: | patched 1 |
|---|
| Gene_symbol: | PTCH1 |
|---|
| Gene_synonyms: | BCNS |
|---|
| Gene_source: | HGNC:9585 |
|---|
|
Transcript annotation
| Transcript_name: | ENST00000437951.5 ENST00000375274.6 NM_001083603 NM_001083602 uc010mrr.4 uc004avm.5 AB189436 AB189437 |
|---|
| Distance: | -119 |
|---|
| Num_trans: | 20 |
|---|
| All_trans: | ENST00000437951.5:-119 ENST00000375274.6:-119 NM_001083603:-119 NM_001083602:-119 uc010mrr.4:-119 uc004avm.5:-119 AB189436:-119 AB189437:-119 ENST00000551623.1:180 ENST00000551425.1:180 uc064unc.1:180 uc010mrw.2:180 AB239329:180 AB212827:180 AB212828:180 ENST00000430669.6:-211 ENST00000468211.6:-211 uc064umn.1:-211 uc004avo.3:-211 BC043542:-211 |
|---|
TATA-Box annotation
| Distance to TSS: | 123 |
|---|
| Nearest PromoterID: | NM_001083602 |
|---|
| Entrez ID: | 5727 |
|---|
| Nearest Unigene: | Hs.494538 |
|---|
| Nearest Refseq: | NM_000264 |
|---|
| Nearest Ensembl: | ENSG00000185920 |
|---|
| Gene Name: | patched 1 |
|---|
| Gene Alias: | BCNS |
|---|
| Gene Description: | patched 1 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.08 |
|---|
| GC%: | 0.562189 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
