Basic information about the TSS
| TSS ID: | hg_101579.1 |
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| Species: | human |
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| Chr: | chr9 |
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| TSS Classification: | yes |
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| Start: | 95516959 |
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| End: | 95516977 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | |
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| End of the center position in the TSS region: | |
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Gene and protein annotation
| Transcript_name: | ENST00000437951.5 ENST00000375274.6 NM_001083603 NM_001083602 uc010mrr.4 uc004avm.5 AB189436 AB189437 |
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| Distance: | 0 |
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| GeneID: | 5727 |
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| HGNC/MGI_ID: | HGNC:9585 |
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| UniProt_ID: | Q13635 Q59FG5 |
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| Gene_name: | patched 1 |
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| Gene_symbol: | PTCH1 |
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| Gene_synonyms: | BCNS |
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| Gene_source: | HGNC:9585 |
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Transcript annotation
| Transcript_name: | ENST00000437951.5 ENST00000375274.6 NM_001083603 NM_001083602 uc010mrr.4 uc004avm.5 AB189436 AB189437 |
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| Distance: | 0 |
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| Num_trans: | 20 |
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| All_trans: | ENST00000437951.5:0 ENST00000375274.6:0 NM_001083603:0 NM_001083602:0 uc010mrr.4:0 uc004avm.5:0 AB189436:0 AB189437:0 ENST00000430669.6:-80 ENST00000468211.6:-80 uc064umn.1:-80 uc004avo.3:-80 BC043542:-80 ENST00000551623.1:302 ENST00000551425.1:302 uc064unc.1:302 uc010mrw.2:302 AB239329:302 AB212827:302 AB212828:302 |
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TATA-Box annotation
| Distance to TSS: | -3 |
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| Nearest PromoterID: | NM_001083603 |
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| Entrez ID: | 5727 |
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| Nearest Unigene: | Hs.494538 |
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| Nearest Refseq: | NM_000264 |
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| Nearest Ensembl: | ENSG00000185920 |
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| Gene Name: | patched 1 |
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| Gene Alias: | BCNS |
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| Gene Description: | patched 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.085 |
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| GC%: | 0.631841 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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